Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1291 ATGGCAATTCCATTGTCGTTCACATTTCTCCTCCTACTTCTGGCTCCTTCCTTCATTTCATCTTCCCCACTTCAAGATCCAGAATTAGTAGTCGAACAAGTGCACAAGAGCATCAATGCGTCGAGAAGAAACCTGGGGTTTCTTTCTTGTGGAACCGGGAATCCCATTGATGATTGTTGGAGGTGTGATCCCAACTGGCATAAGAACAGAAAGCGTCTCGCAGATTGCGGCATTGGGTTCGGCAAGAACGCAATCGGAGGCAGAGACGGCCGATTCTACGTCGTCACCGACCCCGGCGACCACCCTGTGAATCCCAAGCCCGGAACTCTCAGATACGGCGTTATACAGAACAAACCACTGTGGATCGTCTTCAAGAGGGACATGGTGATCAAGCTCAAACAAGAACTTATCATGAACTCCTTCAAAACCATCGATGGCAGAGGAGCCAATGTTCACATCTCAGGTGTCCAGAGAATGCCAAGATGCCGACATGGGTACTTCCATGTGGTAAACAATGATTACACACAGTGGCAGATGTATGCGATAGGAGGGAGTGCTAATCCAACAATAAACAGTCAAGGAAACAGATTTCTTGCTCCTAATGACGGAACCTTCAAAGAGGTGACGAAGAGGGAGTATACGCGGGAGAGTGTATGGAAGAACTGGAACTGGAGGTCTTCAGGGGATCTGATGCTAAACGGTGCATTTTTCACGGAATCCGGCAAGGGAGCGTCTTCGAGCTATGCTCGAGCTTCAAGTTTGTCTGCAAAATCATCATCTTTGGTTAGTTCTATGACAGCTTCATCTGGAGCACTTAAATGCAGAAGGGGCTCGCGTTGCTGA 843 0.4828 MAIPLSFTFLLLLLAPSFISSSPLQDPELVVEQVHKSINASRRNLGFLSCGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGKNAIGGRDGRFYVVTDPGDHPVNPKPGTLRYGVIQNKPLWIVFKRDMVIKLKQELIMNSFKTIDGRGANVHISGVQRMPRCRHGYFHVVNNDYTQWQMYAIGGSANPTINSQGNRFLAPNDGTFKEVTKREYTRESVWKNWNWRSSGDLMLNGAFFTESGKGASSSYARASSLSAKSSSLVSSMTASSGALKCRRGSRC 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1291 280 Gene3D - 53 155 IPR012334 -
Lele24g1291 280 Gene3D - 156 273 IPR012334 -
Lele24g1291 280 SMART amb_all 20 203 IPR002022 -
Lele24g1291 280 SUPERFAMILY Pectin lyase-like 39 155 IPR011050 -
Lele24g1291 280 SUPERFAMILY Pectin lyase-like 152 280 IPR011050 -
Lele24g1291 280 PRINTS Pollen allergen Amb family signature 99 124 IPR018082 -
Lele24g1291 280 PRINTS Pollen allergen Amb family signature 135 151 IPR018082 -
Lele24g1291 280 PRINTS Pollen allergen Amb family signature 76 93 IPR018082 -
Lele24g1291 280 PANTHER PECTATE LYASE 18-RELATED 24 154 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1291 Lele-ChrLele24 18905221 18906796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1291 156 280 Polysaccharide Lyase AT5G63180 73.228 4.48e-53 177