Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1280 ATGGGGGTATTTTCTGTTATGATTATACTTATATTTTATCTTTTAATTTCATCTGCAGTATGCCAACTTCAAGAGTTCATCAGCATAGACTGTGGAGGCACTGGTAATTACACTGATAAAAGCACAGGACTGGCATGGATTTCAGACAATGGGATTATGAACCATGGCACTCAAGTAGATGTAGAAGGTACAAATGGAAACAGGATACAGTATCAGAAACGCAGAGACTTCCCCATAGACAACAGGAAATACTGTTACACACTAAACACCGACGAGAGAAGAAGATACCTGGTGCGAGCAACGTTTCAGTATGGAAACTTGAAAAGTGGAGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACTAAATGGGCCACTGTGTCAATATATGATGCCTCAAGAGTTTATGTGAAGGAAATGATTATTAGAGCCCCCTCAAGCTCTATTGATGTGTGCTTGTGTTGTGCTACCACTGGTTCACCATTCATATCAACTTTAGAGCTAAGGCCCTTGAATCTTTCTATGTATGCCACAGATTTTGAAGACGATTTCTTCTTAAAAGTTGCTGCAAGAATCAATTTTGGTTCTTCAAGTGAGGATGCTATCAGGTACCCAGATGACCCGTATGATAGAATTTGGGAATCGGATCTTGTTAAAAGGCAAAACTATCTTGTTGGGGTGGCCCCAGGCACAGAAAGGATTAATACAACAAAGAACATAGAGATAGGAAGTAGAGAAAACCCCCCTGTCAAAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGGTTACTCAGCTACAGAACTAACCTGGAAGACTTCCCTGCCAATGCTCGAGCTTATGCTTACTTTGCGGAGATTGAAGATCTGGGTAACAATGAGACTCGAAAATTCAAAATGGAGCAACCTTTTATACCTGATTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCCAATGGGAGCTACACTCTATATGAACCTAGTTACATGAATGTGACTCTGGAATTTGTTCTGTCTTTCTCGTTCGTTAAGACCAGGGATTCTACTCGAGGGCCACTTCTAAATGCAATGGAAATAAGCAAGTACCAACTGATTGCTCCAAAGACTGACAAGCAAGATTTGACTGTTGTAAATGAATTCTCCTCCATATCTGCTGAAAGTGTCCAGAAGAATGAAGGTGATCCTTGTGTACCAACTCCCTGGCAGTGGGTAAATTGTAGTGCTGCCACACTTCCAAGAATCACAAAAATAAACCTGTCAAGAAGGAATGTTACGGGCACAATCCCATCTGATATTAACAACATGGGAGAATTGACAGAATTGTGGTTGGATGGAAACTTCATTACAGGGCCACTGCCTGACATGAGCAATCTTATCAATCTAAACATCGTGCATCTAGAGAACAACCAATTGAGTGGTCCATTACCATCTTACCTGGGTAGTTTGCCAAGCTTAGAAGCACTCATTTTGTCAAACTGTGATAGGTTCATACAAAATAACTCGTTTACTGGGGAAATACCAGAAGGATTAGCATCTGGAAAAATCATTTTCAACTATGATGGTAATCCTGGACTACATAAAGGGACCAAGAAACACTTCAAGTTGATACTGGGAATTTCAATAGGAGTTCTTGTCATTCTAGCAATATTATTTTTAGGAAGTTTGATGCTAATGCATAATCTTCGAAAGGCATGCCAACAGAAATGTGATGAAAATGGTATATCTGGACGCAGCATGACCAAACCTATAGGTCCATACTCACTGGTTCGGGGAGGGAGTCTAATGGACGAAGGCATTGCATGCTATATTGGGCTCTCAGACTTGAAAGAAGCTACTGATAATTACGCAAAGAAAATCGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAAAGATGGAAAAGAAGTGGCTGTTAAAATTATGAGTGATTCATGTGCCCATGGGAACCATCAATTTGTGACTGAGGTAGCTCTTCTGTCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATGTAACCGTATTCTGGTTTACGAGTATATGCACAATGGCACCTTGAGGGACCACATTCATGGTTCCGCAAAGCAGAAAAACTTAGACTGGTTAGTTCGTCTTCGTATAGCAGAAGATGCAGCGAAAGGTCTTGAATACTTACATACAGGATGCAATCCGAGCATCATACACCGAGACGTGAAGACCAGCAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTCTCAAGGTTAGCTGAAGAAGATTTAACTCATGTATCAAGTATTGCCAGGGGAACTATAGGTTACTTGGATCCTGAGTACTATGCAACTCAGCAATTGACAGAGAAGAGTGACGTATACAGCTTTGGAGTTGTACTTCTTGAACTCATCGCCGGAAGAAAGCCCGTATCATCAGAAGATTACGGTGCCGAAATGAATATTGTTCACTGGGCTAGGTCGTTAATTCGCAAAGGCGATGTGGTGAGCATAATGGATCCATCTTTAGTAGGGAACGTGAAAACGGAATCGATTTGGAGGGTTGCGGAAATCGCAATGCAATGCGTACTACAACACGGGGCGTGCAGGCCGAGGATGCAAGAGATCATACTGGCGATACGAGAAGCAATCAACATTGAGAAAGGAACAAACAGTAACATGAAATTATCATCCTCAGGTAGTTCGAAAGCTCAATCTTCGAGAAAAACTTTACTCACAAGCTTCCTCGAAATTGAGAGCCCTGATTTGTCCAATGGTTGCCTCCCTACTGCAAGATAA 2811 0.4134 MGVFSVMIILIFYLLISSAVCQLQEFISIDCGGTGNYTDKSTGLAWISDNGIMNHGTQVDVEGTNGNRIQYQKRRDFPIDNRKYCYTLNTDERRRYLVRATFQYGNLKSGDTYPQFQLYLDATKWATVSIYDASRVYVKEMIIRAPSSSIDVCLCCATTGSPFISTLELRPLNLSMYATDFEDDFFLKVAARINFGSSSEDAIRYPDDPYDRIWESDLVKRQNYLVGVAPGTERINTTKNIEIGSRENPPVKVMQTAVVGTKGLLSYRTNLEDFPANARAYAYFAEIEDLGNNETRKFKMEQPFIPDYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVKTRDSTRGPLLNAMEISKYQLIAPKTDKQDLTVVNEFSSISAESVQKNEGDPCVPTPWQWVNCSAATLPRITKINLSRRNVTGTIPSDINNMGELTELWLDGNFITGPLPDMSNLINLNIVHLENNQLSGPLPSYLGSLPSLEALILSNCDRFIQNNSFTGEIPEGLASGKIIFNYDGNPGLHKGTKKHFKLILGISIGVLVILAILFLGSLMLMHNLRKACQQKCDENGISGRSMTKPIGPYSLVRGGSLMDEGIACYIGLSDLKEATDNYAKKIGKGSFGSVYYGKMKDGKEVAVKIMSDSCAHGNHQFVTEVALLSRIHHRNLVPLIGYCEEECNRILVYEYMHNGTLRDHIHGSAKQKNLDWLVRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHVSSIARGTIGYLDPEYYATQQLTEKSDVYSFGVVLLELIAGRKPVSSEDYGAEMNIVHWARSLIRKGDVVSIMDPSLVGNVKTESIWRVAEIAMQCVLQHGACRPRMQEIILAIREAINIEKGTNSNMKLSSSGSSKAQSSRKTLLTSFLEIESPDLSNGCLPTAR 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1280 936 FunFam serine/threonine-protein kinase PBS1-like 594 689 - -
Lele24g1280 936 ProSitePatterns Protein kinases ATP-binding region signature. 620 642 IPR017441 GO:0005524
Lele24g1280 936 Gene3D Transferase(Phosphotransferase) domain 1 690 909 - -
Lele24g1280 936 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 690 897 - -
Lele24g1280 936 Gene3D Phosphorylase Kinase; domain 1 594 689 - -
Lele24g1280 936 SUPERFAMILY Protein kinase-like (PK-like) 604 881 IPR011009 -
Lele24g1280 936 CDD STKc_IRAK 620 881 - -
Lele24g1280 936 SMART serkin_6 614 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1280 936 Gene3D Ribonuclease Inhibitor 370 523 IPR032675 -
Lele24g1280 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Lele24g1280 936 Pfam Malectin-like domain 29 362 IPR024788 -
Lele24g1280 936 Pfam Protein tyrosine and serine/threonine kinase 617 881 IPR001245 GO:0004672|GO:0006468
Lele24g1280 936 ProSiteProfiles Protein kinase domain profile. 614 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1280 936 FunFam Leucine-rich repeat receptor-like kinase 372 483 - -
Lele24g1280 936 PANTHER OS07G0107800 PROTEIN-RELATED 27 888 - -
Lele24g1280 936 SUPERFAMILY L domain-like 397 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1280 Lele-ChrLele24 18778360 18783270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1280 1 936 Receptor kinase-like Gene Family AT1G67720 67.519 0.0 1270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele24g1280 Malectin_like 1.2e-89 CL0202