Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1276 ATGGAATCGAAAATGGGAAAAGGGAAGAAAAGTTTGATCATCAAGACATGGGAGCGATGCAAGTCCATCGGACGCCGCGGTGGCGGCGGCAAGAACAAACGATACAAGGCTATTGAATCAGTGGTGGTGGGTCTGAGAAGCAAAAGCAAATCCTGTCCTAACTTTGACCTCAAGGTGTTCGAAGAAAAGCCAGCGAACAATAAATCGATTCAGGTTGCTCCAGACGGCTGCTTCTCCGTCTACGTGGGGCCTCAGAGGCAGAGGTTTGTGATCAAAACAGAGTTTGCAAACCACCCTCTCTTCAAGATCTTGCTGGAAGAAGCAGAATCAGAGTATGGATATAACAGCCAAGGCCCCTTAATCCTTCCCTGCGATGTTCATATATTTCTTAAGGTACTCATGGAAATGGACCAAGAAACTGATGAAGATCAAATCCGTCATGGCTGTGGTTTTGTGAAGCGCTCAACCTCATATCACCTTCTAACCCCATCTCGAATGCTCGCCATAAATCCCCTGTGA 519 0.4701 MESKMGKGKKSLIIKTWERCKSIGRRGGGGKNKRYKAIESVVVGLRSKSKSCPNFDLKVFEEKPANNKSIQVAPDGCFSVYVGPQRQRFVIKTEFANHPLFKILLEEAESEYGYNSQGPLILPCDVHIFLKVLMEMDQETDEDQIRHGCGFVKRSTSYHLLTPSRMLAINPL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1276 172 Pfam Auxin responsive protein 54 133 IPR003676 GO:0009733
Lele24g1276 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 59 133 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1276 Lele-ChrLele24 17600883 17601401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1276 13 133 Calmodulin-binding Proteins AT3G43120 34.959 7.45e-19 77.0