Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1268 ATGGCTGGTAATGTTGTGGGAAAGTTGAATGGGAATGGAACATTTGCAGTGGAGTCATCAACATCTGGATCAGGGAAGAGAAGCAGAACACCTAGCCGTGGAATCCAAGTTGCTTCATGTTTGGTTGATGGATGCAATTCAGACCTTAGTAAATGCAGAGACTATCACAGACGCCACAAGGTTTGTGAACTTCACTCTAAGACCCCTAAGGTCACAATCAGGGGTCAGGAACAACGCTTCTGCCAGCAGTGCAGCAGGTTCCATTCATTGGAGGAGTTTGATGAAGGAAAGAGAAGCTGCAGGAAACGTCTTGATGGGCACAACCGACGCAGGAGAAAGCCTCAACCAGAACCCCAGCCAGCAAGATTTCTTGCTGAATACCCAGGTACTAGAATCTCAGCATTCAACAATTCTCAAATACTTTCAACAGGTCCTAGTTTGAGCAGTACTTGGGGTAGGCCTCTTAAAACTGAGAATGATTATTATGTTTCCTGCAAGCTTGATAATGGCAGAAATAATGGGCCAATTGGTGAAACTCTGAGTGAGCAAGGATCACTGGGACAGAGACAAATTTCATTTCTTCAAAGCCCCAAATTCTCACTCTATGGATATTCTGCCAGTGAACTGAACTTAAATTCCAACTTTGCATCAGAAAATGCAGGCAATAACAACAGCAGCAGCAGCAACCAGAAAGCATTCTCGTATTTTGCTCGCTCTCTTCTGTCATCAACACAACCACCTGAGACTCATGAGGTTGGCTATGAAATCCCTCAAGCTTTGAACATGGATGCTTCAGAAATGGTGAGCCATGGCCATAATAATACAATTAATTGTGAGGGGATGATGTTTAGTATTGGATCTGATGGGTCGTCTTCGTGTGGTTCTTCCCATAAACTCTTCATGTGGGAGTAA 912 0.4408 MAGNVVGKLNGNGTFAVESSTSGSGKRSRTPSRGIQVASCLVDGCNSDLSKCRDYHRRHKVCELHSKTPKVTIRGQEQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPEPQPARFLAEYPGTRISAFNNSQILSTGPSLSSTWGRPLKTENDYYVSCKLDNGRNNGPIGETLSEQGSLGQRQISFLQSPKFSLYGYSASELNLNSNFASENAGNNNSSSSNQKAFSYFARSLLSSTQPPETHEVGYEIPQALNMDASEMVSHGHNNTINCEGMMFSIGSDGSSSCGSSHKLFMWE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1268 303 MobiDBLite consensus disorder prediction 1 33 - -
Lele24g1268 303 ProSiteProfiles Zinc finger SBP-type profile. 37 114 IPR004333 GO:0003677
Lele24g1268 303 Gene3D - 32 101 IPR036893 GO:0003677|GO:0005634
Lele24g1268 303 MobiDBLite consensus disorder prediction 13 33 - -
Lele24g1268 303 FunFam Squamosa promoter-binding-like protein 14 31 101 - -
Lele24g1268 303 SUPERFAMILY SBT domain 38 117 IPR036893 GO:0003677|GO:0005634
Lele24g1268 303 Pfam SBP domain 40 113 IPR004333 GO:0003677
Lele24g1268 303 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 20 277 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1268 Lele-ChrLele24 16988885 16990317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1268 36 155 SBP-box Gene Family AT5G50670 63.415 1.53e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele24g1268 SBP 8.3e-31 No_clan