Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1263 ATGATTATGGGTCTATTATTCATGAGGTCGAACTTTGACCATGATTTGTTTCCTTCTCAGCGTCTTTGCTCTGCCCACTTGTGTGCAAATCACGAGCAGGTTCTTCGTTTCCGTTACAATATTAATGATCTGTACCAAGAAGCTCAAAGGCGATGGCTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAACAGTATCAGATAACTCAAGAGAACCCTCAACAGCCACCCAGTGGATCCTTGTTTCTGTTTAACAGAAGAGTTCTGCGCTTTTTTCGTAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAGAACTGTAGGAGAGGCACATGAACGACTTAAGGTTGGAAATGTTGAAGCCTTAAATTGTTACTACGCACATGGAGAGCAGAACCCCACTTTTCAGAGGCGGAGCTATTGGATGTTGGATCCGGCTTATGAGCATATTGTTCTGGTACATTACAGAGAAACAAGTGAGGGAAGGTCCAATTCTGGACCTGTCACACAACAGTCAAAAGGATCCTCATCTACATTCAGTCAGAGTCCTAGCTCATACACTACCCAGAAGCTAGGGTCAACGTCCATGTTTGGTGATTCGTATGAACCTAATCAGAGTTTCTCCAGTCCTGCATCTGTAGAATTCACATCTGATACAGTCATCAAGAATAATGGAATAGATAACTTGGATGGAATAGAGGCAGAGTCAGGAAATTCACCTGAACTTGAGGTTACTCAAGCCTTGCGCCGACTGGAGGAGCAGTTAAGTTTGAATGAGGACAGCTTCAGAGAAATTGATTCCTTCAGCAGCGAGCAGGAGAACACAAATGATTCTAGTCCCCAACAAAATACAATGGCAATCAACAATCAAGATATTAATGCATCGTGGCCTGCACTGAGTGATCATGGCCAATCTTATGATGGACATAGTGCCAGACAAGACCATAATTGCTCTGGCGGAACTGAGAAGACTTTGTACTGGAAGGAGATGCTGGATTCATGCAAGCCCCTGTCCTCGGCTAATTTGCAAGAGAAACACGTTTACAGACCTGCTGGAAATGGAAACTCACTTTCTTCTTCGGGAAGGTTACCAATTGCCAACCAGGAAAGCAGTCACGGGATCAGCTTTGGCAGTAACAATGCTGAAAACTCTTCCTTTTCACTGACTCAAGACATTCATGGAGTCAGATTTTCTCCATATTCTTCTATAGAAACTCAAGGAGCTAATTTGGACTATTATGAATCATATTTTGACCAAAAGCAAATTGAAGCTCCTCTGGATGTAGATTTAGGTTTGACTGTGGCACAAAAGATGAAGTTCACAATTGAGGAAGTATCTCCAGAATGGGGTTATGCTACTGAAGCCACGAAGGTTATCGTTGTTGGATCATTTCTCTGTCATCCCAAGAGTTCTACCTGGGCTTGTATGTTTGGTGATGTTGAAGTTCCTGTTGAAATAATTCAAGATGGTGTGATTCGTTGTGAAGCTCCATCTCACCTTCCTGGAAAGGTTACTCTCTGCATTACCTCTGGGAATCGGGAGTCCTGCAGTGAAGTTCGTGAGTTTGAGTATCGCAATAAGGATAGTTGTCCTAACTGCAATTCATTAGAAACAGAATCCACTAGAAGTCCTGAAGAACTGCTATTACTTGTTAGATTTGCGCAGATGATTCTTTCTGATTCTTCCATGATAGAAGCTGGAAATTATGAACTGGGAAAACAGACATTTGATGATGATTCATGGATCCATGTTATTGAGGCTCTTCTAGTTGGCAGTGGAACTTCATCTGGTACCGTCGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGTTGCAGTTGTGGCTTTCTTCCAGATCCCACAAAATAAATGATGAGACAGGCTCTTCTTTGTCCAAAAGGGAGCAGGGCATTATACACATGGTTGCTGGGTTAGGTTTCGAGTGGGCTTTGAACCCCATTCTCAGCTGTGGTGTGAACATAAATTTCCGCGACATCAATGGATGGACTGCCCTGCATTGGGCTGCACGATTTGGGAGGGAAAAAATGGTTGCTTCACTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAACTAACCAAGATCCAACTGGTAAAACGGCAGCTTCTATTGCAGCCAACAGTGGGCATAAGGGTTTGGCAGGTTATCTTTCAGAGTTATCTCTAACAAGCCATTTATCTTCCCTCACCCTGGAAGAAAGCGAGCTGTCTAAAGATTCTGCTGAGCTTGAAGCAGAGTTAGCTGTTAGTACTGTCTCCAGTGAGCATCTAACAGCCGGTGAAGATCAGATTTCACTCAAACATACCTTGGCTGCTGTGCGTAATTCAGCTCTGGCAGCTGCACGTATACAGTCTGCTTTCCGTGCACATTCCTTTAGGAAACGGAGAGAGAGAGAGGCTGCGATTTCTGCAGCAGCCGCCATATCAATTCAGAAGAAGTATCGGGGATGGAAAGGCCGCAAAGATTTTTTGTCATTACGTAAAAAAGTAGTGAAGATACAGGCTCATGTAAGGGGTTACCAGGCTAGAAAGCATTACAAGATAATATGTTGGGTAGTTGGGTTCTTTGACAAGGCTGTGTTACGATGGAAGAGGAAAGGGGCTGGTTTGCGAGGTTTCCGACAGGAGAGAAACTCAATTGAAGAAAATGAAGAAGAAGATATTCTAAAGGTGTTCCGCAAACAGAAAGTAGATGACGCAGTTGAACAGGCTGTTTCGCGGGTTCTGGCCATGGTTGATTCTCCGAATGCTCGTCAACAATATCATCGCATGCTTGAAAAGTTTCGTCAAGCCAAGGCTGAACTCGGCAGTACAAGTCAAGGAGTACCGTTATCTTTTCTGAAGGATGCCTACAATATGGAAGATGATGTCTTAAATCGGTTTCCCTAG 2922 0.4357 MIMGLLFMRSNFDHDLFPSQRLCSAHLCANHEQVLRFRYNINDLYQEAQRRWLKPAEVMYILQNHEQYQITQENPQQPPSGSLFLFNRRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAYEHIVLVHYRETSEGRSNSGPVTQQSKGSSSTFSQSPSSYTTQKLGSTSMFGDSYEPNQSFSSPASVEFTSDTVIKNNGIDNLDGIEAESGNSPELEVTQALRRLEEQLSLNEDSFREIDSFSSEQENTNDSSPQQNTMAINNQDINASWPALSDHGQSYDGHSARQDHNCSGGTEKTLYWKEMLDSCKPLSSANLQEKHVYRPAGNGNSLSSSGRLPIANQESSHGISFGSNNAENSSFSLTQDIHGVRFSPYSSIETQGANLDYYESYFDQKQIEAPLDVDLGLTVAQKMKFTIEEVSPEWGYATEATKVIVVGSFLCHPKSSTWACMFGDVEVPVEIIQDGVIRCEAPSHLPGKVTLCITSGNRESCSEVREFEYRNKDSCPNCNSLETESTRSPEELLLLVRFAQMILSDSSMIEAGNYELGKQTFDDDSWIHVIEALLVGSGTSSGTVDWLLEELLKDKLQLWLSSRSHKINDETGSSLSKREQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPTNQDPTGKTAASIAANSGHKGLAGYLSELSLTSHLSSLTLEESELSKDSAELEAELAVSTVSSEHLTAGEDQISLKHTLAAVRNSALAAARIQSAFRAHSFRKRREREAAISAAAAISIQKKYRGWKGRKDFLSLRKKVVKIQAHVRGYQARKHYKIICWVVGFFDKAVLRWKRKGAGLRGFRQERNSIEENEEEDILKVFRKQKVDDAVEQAVSRVLAMVDSPNARQQYHRMLEKFRQAKAELGSTSQGVPLSFLKDAYNMEDDVLNRFP 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1263 973 FunFam Calmodulin-binding transcription activator 4 isoform A 551 734 - -
Lele24g1263 973 ProSiteProfiles IQ motif profile. 837 861 IPR000048 GO:0005515
Lele24g1263 973 MobiDBLite consensus disorder prediction 161 215 - -
Lele24g1263 973 Gene3D - 814 860 - -
Lele24g1263 973 MobiDBLite consensus disorder prediction 355 379 - -
Lele24g1263 973 ProSiteProfiles IQ motif profile. 790 816 IPR000048 GO:0005515
Lele24g1263 973 Pfam CG-1 domain 47 160 IPR005559 GO:0003677
Lele24g1263 973 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 40 945 - -
Lele24g1263 973 SMART iq_5 813 835 IPR000048 GO:0005515
Lele24g1263 973 SMART iq_5 786 808 IPR000048 GO:0005515
Lele24g1263 973 SMART iq_5 836 858 IPR000048 GO:0005515
Lele24g1263 973 Pfam IQ calmodulin-binding motif 838 858 IPR000048 GO:0005515
Lele24g1263 973 Pfam IQ calmodulin-binding motif 816 834 IPR000048 GO:0005515
Lele24g1263 973 SUPERFAMILY E set domains 444 528 IPR014756 -
Lele24g1263 973 Gene3D - 592 734 IPR036770 -
Lele24g1263 973 Coils Coil 737 757 - -
Lele24g1263 973 ProSiteProfiles Ankyrin repeat profile. 669 701 IPR002110 GO:0005515
Lele24g1263 973 FunFam Calmodulin-binding transcription activator 2 438 532 - -
Lele24g1263 973 SMART CG_1_2 44 162 IPR005559 GO:0003677
Lele24g1263 973 MobiDBLite consensus disorder prediction 298 322 - -
Lele24g1263 973 ProSiteProfiles IQ motif profile. 814 843 IPR000048 GO:0005515
Lele24g1263 973 CDD IPT 444 528 - -
Lele24g1263 973 Pfam IPT/TIG domain 444 527 IPR002909 -
Lele24g1263 973 ProSiteProfiles Ankyrin repeat region circular profile. 669 695 - -
Lele24g1263 973 SMART ANK_2a 669 698 IPR002110 GO:0005515
Lele24g1263 973 SMART ANK_2a 708 737 IPR002110 GO:0005515
Lele24g1263 973 MobiDBLite consensus disorder prediction 354 379 - -
Lele24g1263 973 ProSiteProfiles CG-1 DNA-binding domain profile. 41 167 IPR005559 GO:0003677
Lele24g1263 973 Gene3D Immunoglobulins 438 532 IPR013783 -
Lele24g1263 973 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 791 863 IPR027417 -
Lele24g1263 973 FunFam Calmodulin-binding transcription activator 2 813 861 - -
Lele24g1263 973 Pfam Ankyrin repeats (3 copies) 651 729 IPR002110 GO:0005515
Lele24g1263 973 SUPERFAMILY Ankyrin repeat 638 730 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1263 Lele-ChrLele24 16879858 16890111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1263 37 973 CAMTA Transcription Factor Family AT1G67310 50.390 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lele24g1263 CG-1 4.3e-50 No_clan