Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1246 ATGGCTTCATGTTCATCAGTGTGGATGATGCTTGCATTGTTTCTGGTAACATCAAACTGCGAAGCAGAAGAGTATTTGGTTAGAGACAAAAAATCTTCATGGCAGCTTCCTCTTCCTCAAGCTAAGTTGCTCATCCACAGGGCCTTGACTCATCGTCTCGAGATTGGCGATTCTCTAACCCTGAAGTATGATCAAGGATCGGATCGGTCAGTGGTAGAAGTGAAAGAGGAACATTATCGTAACTGCGACAAGTCTAACCCTATTCAAGGTTACAATAATGGAGAGGCTAGGGAGTTGAACGGGTTAGGGCCATTTTACTTTATAAGTGGGACACAAGATCATTGTGAGCAAGGGTTGAAACCGCATGTTAGAGTCACACCTAACCAGTGTTTTACATGTCATCGTGGTCCAGAGAAGTCTCCACCACGTACTTGTTCTGCATGTCATAGTCTACCGGATTCTCATCCGGATTCAAAAGAGAAGAAATCTGAACCAGGGTCAAAAGAGAAGAAATCTCACCAGGATCCATCTACTTGCGATACATGTTCATAA 552 0.4366 MASCSSVWMMLALFLVTSNCEAEEYLVRDKKSSWQLPLPQAKLLIHRALTHRLEIGDSLTLKYDQGSDRSVVEVKEEHYRNCDKSNPIQGYNNGEARELNGLGPFYFISGTQDHCEQGLKPHVRVTPNQCFTCHRGPEKSPPRTCSACHSLPDSHPDSKEKKSEPGSKEKKSHQDPSTCDTCS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1246 183 Gene3D - 21 131 IPR008972 -
Lele24g1246 183 Pfam Plastocyanin-like domain 48 118 IPR003245 GO:0009055
Lele24g1246 183 SUPERFAMILY Cupredoxins 21 127 IPR008972 -
Lele24g1246 183 PANTHER BLUE COPPER PROTEIN 24 137 IPR039391 GO:0009055
Lele24g1246 183 SUPERFAMILY Multiheme cytochromes 116 182 IPR036280 -
Lele24g1246 183 MobiDBLite consensus disorder prediction 136 183 - -
Lele24g1246 183 MobiDBLite consensus disorder prediction 153 176 - -
Lele24g1246 183 ProSiteProfiles Phytocyanin domain profile. 23 127 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1246 Lele-ChrLele24 16606656 16607333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1246 9 129 Phytocyanin Superfamily AT5G25090 36.066 4.16e-22 86.7