Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1223 ATGGCTCTTGCTGTTGATACTCCATTGGGTGTTCTCAATGCTACATTCTTCATCGCTATTTTGATATGGGTTTTGGTTGATAGTTTGAGAGAAAGTAGGCGTAACGATGTTTTATATTTGAAACACGTACCGAAACGATTCGCTGCTTTCTCCGGAATCACGCTTGTGTTTCATGTTATTCTTTCGGTTTTGAACTTCGCTTTTGCGTTTCATGAATATTGGACGGAGAAAATCGTGTCGTATTACTCTGTTTCTTTGGCTCTTACTTGGGTTTTGGCGACCTTGGTTTCGGTGTACTCAGTGAAAAGAATACGCCGCCAAAACAAAACGTGGCCTCTCGTTTTGATTCTCTGGTGGTTCTTCGCCACTGTATTGGATTTGATCTTGGTTTCTTTGAAACTCGTCAAGAATTTCAAATCTTGGGATTTGTCTTTCTTTCTGTTAGAGGAAAACGTGGTGGATTTCGTTTCCTTTCCTCTTTTGTTACTTCTCTGGCTCAGTGCTCTGCCTTCTGTTTGGACGAGCAAATGTAGTGAATCAGAACACGTGTTGCTTCAAAAGGACGAAGACGAAGATGAGGAAGATAAAGAAGCATTCATAAATGCTGGAATATGGAGCAAGCTCACGTTTCAATGGCTGAATCCTATTTTCAGGAGAGGTCAGATTCAGAAACTTGAACTTCCCCATATTCCTTCAGTTCCTCAATCTGAAACTGCAGAATATGCTTATTCCATGCTCGAAGATTCACTCCGAAAACGTAAACTCGAAAACGGTTCATTGACGAATGCTATTGCTCACTCTATCTGGAAACCCTTGACCTTGAATGCAGTTTTCGCAGGTGTTAACACAATGGCCTCTTACATGGGTCCCTTGTTGATCACAAACTTCGTGAATTTCTTGTCGGGAGATCATAACGACTCAAGCATCCACTCCGGGCTAATTCTTGCGTTCATTTTCTTCCTGGCGAAGACCCTGGAATCGCTGAGTCAAAGACAGTGGTACTTTGGAGCTCAACGAATAGGAATTCAAGTCCGTGCAGCTCTCATGGGTTTGATATACATCAAATCACTCTCAATCAAGTGTGATGGACCAACAAATGGTAAAACCATAAACTTAATCAGTGTGGATGTTGAAAGGATTGGAGATTTCTGCTGGTACATTCATCGAGTATGGTTACTTCCAGTTCAGGTTGTGTTGGCCTCGGTTATCTTGTACAGGAATTTAGGATTTGCACCCTCCATTGCTGCATTTGCTGTTACTATTTTGGTCATGGTTTGCAACACTCCCATGGCTAATATGCAGAAAAGTCTTCACTCCAAGATTATGGAAGCTAAGGATTCGAGGATTAAAGCGACTTCAGAGATTCTAAGGAACGTGAGAATTTTGAAATTGCATTCATGGGAATCCACATATCTGAAGAAGCTTCATCAGCTTAGGGAAACTGAGAAGAACTGGCTTAAGAAATATCTGTATACTTGCTCAGCAGTGACATTTCTGTTTTGGACATCACCAACTCTTGTTTCTGTGGTCACTTTTGGTGTCTGTATATTGGTGAAAACAGAATTAACAGCAGCCACAGTGCTGTCAGCTTTAGCAACTTTTCGTATCTTACAAGAACCAATCTACAACTTACCTGAGCTTGTTTCCATGATAGTTCAAACGAAAGTGTCCATTGATCGGATCCGAGAGTTCATTAAAGAAGAGGATCAAATGCACTTCATGACTAAGCCTACGTTCAAACATTCTGATGTTGCCATTGAAATTAAAACAGGTGAATACTCATGGGAAGCTGATGATCAATACTATAAGAAACCAACTATTCAAATTACAGAGAAGTTGAAGATAGAGAAAGGTCAAAAGGTTGCAATATGTGGGTCGGTGGGGTCAGGCAAATCAAGCCTGTTATGCTGTATGCTTGGTGAGATTCCGAGGATTTCAGGGGCAGGAATTAAAGTATATGGAAATAAAAGTTATGTGCCCCAAAGTCCTTGGATTCAATCGGGGACTATAAGAGAAAATATACTATTTGGCAGAAAAATGAACGTGGAATTGTACGAGAATGTCCTGGAATGCTGTGCATTGCACCGGGATATCAACCAGTGGGAAGATGGAGATTTGACCATGGTGGGGGAGAGGGGCATAAACTTAAGTGGAGGCCAAAAACAGAGAATTCAACTGGCAAGAGCTGTTTACAATGATTCAGATATTTATTTCCTAGATGACCCTTTCAGTGCTGTTGATGCTCATACTGGAACTCATTTGTTTAAGAAATGTCTCTTACAACTTCTATCTGAGAAAACAGTTGTTTATGCTACCCATCAACTGGAATTTTTGGAAGCTGCTGACCTTGTCTTGGTGATGAAAGATGGAAAAATAGTTGGGTCAGGAAAGTATAAAGATCTGATAGCATGTCACACTTGTGAACTTGTTGATCAAATGGCTGCTCATAAGGAAACTATAAAGCAAATTAGACCATGCCGTGAGGATAAATCCTTATCCAAGAACTTTACACCATTTCGGATACAACAAATCGAAGTATCTGAAACAAATCTTGCTACGAAACTTGAAGAAAACAGGAAACATTTGGAGAGAAGCAAAGAAGAGAAAGCAGAGACGGGTCGGGTTGATTGGAGTGTTTACTCAACCTTTGTCACGTTTTCTTATAGAGGCGCATTTGTTCCTGTTATTCTCCTATGCCATATTATCTTTCAAGGAATGCAAATGGGAAGCAATTATTGGATTGCTTGGGCTGCAGAACAGAGAGCCAGTGTTAGTAAAGGGACGCTTATTGGGACCTTTGTTCTGCTATCTGGTGGCAGTTGCATCTTCATACTGGGAAGGTCTGTTTTCATGGCAAAAATTGCTGTAGAGACAGCTCAACGTCTGTATCATGAAATGATCACATCAGTTTTCAGAGCTCCTGTTTCCTTTTTTGATACCACCCCTACAAGCAGAATCTTGAATAGGTGTTCCACAGATCAAAGTACAGTGGACACAGATATACCATACAGACTAGCTGGACTTGTATTTGCACTTATCCAGTTATTGAGTATCATCATTCTAATGTCCCAGGTTGCTTGGAAAGTCATTCTTTTCTTTGTTGTCGTGCTTGCGATTTCCATCTGGTATCAGGCTTATTACATTACTACTGCTAGAGAATTGGCCAGGATGGTAGGGATCAGGAAGGCTCCAATCTTGCATCACTTCTCAGAATCAATTGCTGGTGTGGCCACAATCCGTTGTTTCAATCAACAGCATAGATTTTATAGGAAAGTTATGGCTCTAATTGATGATTATTCTCGTGTGCCATTTCATAATTATGCCACCATGGAATGGTTATCCGTTAGAATCAACTTTCTCTTTAATGTAGTCTTCTTTTTCGTTCTCATCATCTTGCTTACACTGCCAAGGTCTGCCATTGATCCTAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAGTGTTCTTCAGGCTTGGGTGATATGGAACCTCTGCAATGTGGAAAACAAAATGATATCTGTTGAGAGAATACTCCAATTCACAAAGATACAGAGTGAAGCGCCACTGATAATTCAAGATTGTAGGCCACAACTGGAGTGGCCAAGGGAGGGGAAGATTGAGCTTCAGAATCTTCACATACAGTATGATCCTGCAGCTCCTATGGTTCTGAAAGGTGTCACTTGCACCTTTCCAGGACACAAGAAGATTGGAGTTGTAGGGAGGACAGGAAGTGGAAAATCTACGTTAGTGCAAGTGCTCTTCCGAGTGGTAGAACCTTCAGTAGGAAGGATACTAATTGATTGTGTAGATATCTGCAAGATTGGCCTAAAGGATCTAAGATCCAGGCTTGGGATAATTCCTCAGGATCCTACCTTGTTTCAAGGTACTGTAAGGAATAACTTGGATCCTCTTGAACAACACTCAGACCAAGAACTTTGGGAGGTTCTTGGTAAGTGCCATCTTGCTGATATAGTTAGGAAGGATCCAAGGCTTCTTGATGCATCAGTGGCTGAGAATGGAGAGAATTGGAGTGTTGGACAAAGGCAGCTTGTTTGTCTTGCCAGGCTGCTATTGAAGAAAAGAAGAATTTTGGTTCTTGATGAAGCTACTGCATCGATTGACACGGGGACCGATAATTTAATTCAAAAGACTATTAGAGAAGAGACAAGCGAATGCACAGTCATCACGGTGGCACATAGGATTCCTACAGTTATTGATAATGACCTTGTATTGGTCCTCGACGAAGGGAGGATTGCAGAGTTTGATAAGCCAGCTAAGTTGCTAGAGAATAATTCATCATCATTCTCAAAGCTAGTTTCAGAATTTTTGAGGAGATCAACTGATCAAAGGATTATCAAAGGGACACAAGAATGTGAAGACAGATAG 4392 0.411 MALAVDTPLGVLNATFFIAILIWVLVDSLRESRRNDVLYLKHVPKRFAAFSGITLVFHVILSVLNFAFAFHEYWTEKIVSYYSVSLALTWVLATLVSVYSVKRIRRQNKTWPLVLILWWFFATVLDLILVSLKLVKNFKSWDLSFFLLEENVVDFVSFPLLLLLWLSALPSVWTSKCSESEHVLLQKDEDEDEEDKEAFINAGIWSKLTFQWLNPIFRRGQIQKLELPHIPSVPQSETAEYAYSMLEDSLRKRKLENGSLTNAIAHSIWKPLTLNAVFAGVNTMASYMGPLLITNFVNFLSGDHNDSSIHSGLILAFIFFLAKTLESLSQRQWYFGAQRIGIQVRAALMGLIYIKSLSIKCDGPTNGKTINLISVDVERIGDFCWYIHRVWLLPVQVVLASVILYRNLGFAPSIAAFAVTILVMVCNTPMANMQKSLHSKIMEAKDSRIKATSEILRNVRILKLHSWESTYLKKLHQLRETEKNWLKKYLYTCSAVTFLFWTSPTLVSVVTFGVCILVKTELTAATVLSALATFRILQEPIYNLPELVSMIVQTKVSIDRIREFIKEEDQMHFMTKPTFKHSDVAIEIKTGEYSWEADDQYYKKPTIQITEKLKIEKGQKVAICGSVGSGKSSLLCCMLGEIPRISGAGIKVYGNKSYVPQSPWIQSGTIRENILFGRKMNVELYENVLECCALHRDINQWEDGDLTMVGERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLLQLLSEKTVVYATHQLEFLEAADLVLVMKDGKIVGSGKYKDLIACHTCELVDQMAAHKETIKQIRPCREDKSLSKNFTPFRIQQIEVSETNLATKLEENRKHLERSKEEKAETGRVDWSVYSTFVTFSYRGAFVPVILLCHIIFQGMQMGSNYWIAWAAEQRASVSKGTLIGTFVLLSGGSCIFILGRSVFMAKIAVETAQRLYHEMITSVFRAPVSFFDTTPTSRILNRCSTDQSTVDTDIPYRLAGLVFALIQLLSIIILMSQVAWKVILFFVVVLAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGVATIRCFNQQHRFYRKVMALIDDYSRVPFHNYATMEWLSVRINFLFNVVFFFVLIILLTLPRSAIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFTKIQSEAPLIIQDCRPQLEWPREGKIELQNLHIQYDPAAPMVLKGVTCTFPGHKKIGVVGRTGSGKSTLVQVLFRVVEPSVGRILIDCVDICKIGLKDLRSRLGIIPQDPTLFQGTVRNNLDPLEQHSDQELWEVLGKCHLADIVRKDPRLLDASVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTGTDNLIQKTIREETSECTVITVAHRIPTVIDNDLVLVLDEGRIAEFDKPAKLLENNSSSFSKLVSEFLRRSTDQRIIKGTQECEDR 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1223 1463 Gene3D - 1191 1444 IPR027417 -
Lele24g1223 1463 FunFam ABC transporter C family member 5 856 1189 - -
Lele24g1223 1463 FunFam ABC transporter C family member 10 256 569 - -
Lele24g1223 1463 CDD ABCC_MRP_domain1 586 791 - -
Lele24g1223 1463 Pfam ABC transporter 1225 1373 IPR003439 GO:0005524
Lele24g1223 1463 SUPERFAMILY ABC transporter transmembrane region 267 568 IPR036640 GO:0005524|GO:0016020
Lele24g1223 1463 CDD ABCC_MRP_domain2 1206 1426 - -
Lele24g1223 1463 FunFam ABC transporter C family member 3 1191 1443 - -
Lele24g1223 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1200 1434 IPR027417 -
Lele24g1223 1463 Gene3D - 608 836 IPR027417 -
Lele24g1223 1463 Pfam ABC transporter 612 743 IPR003439 GO:0005524
Lele24g1223 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1208 1442 IPR003439 GO:0005524
Lele24g1223 1463 SMART AAA_5 1234 1427 IPR003593 -
Lele24g1223 1463 SMART AAA_5 617 791 IPR003593 -
Lele24g1223 1463 Coils Coil 852 872 - -
Lele24g1223 1463 CDD ABC_6TM_ABCC_D1 274 561 IPR044746 GO:0140359
Lele24g1223 1463 Gene3D ABC transporter type 1, transmembrane domain 262 570 IPR036640 GO:0005524|GO:0016020
Lele24g1223 1463 Gene3D ABC transporter type 1, transmembrane domain 855 1189 IPR036640 GO:0005524|GO:0016020
Lele24g1223 1463 SUPERFAMILY ABC transporter transmembrane region 895 1183 IPR036640 GO:0005524|GO:0016020
Lele24g1223 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 895 1171 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g1223 1463 Pfam ABC transporter transmembrane region 905 1134 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g1223 1463 Pfam ABC transporter transmembrane region 273 540 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g1223 1463 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 201 1442 - -
Lele24g1223 1463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 276 553 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele24g1223 1463 FunFam Multidrug resistance-associated protein 4 572 831 - -
Lele24g1223 1463 ProSitePatterns ABC transporters family signature. 716 730 IPR017871 GO:0005524|GO:0016887
Lele24g1223 1463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 588 814 IPR003439 GO:0005524
Lele24g1223 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 611 804 IPR027417 -
Lele24g1223 1463 CDD ABC_6TM_ABCC_D2 893 1183 IPR044726 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1223 Lele-ChrLele24 16192316 16198444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1223 576 835 Calmodulin-binding Proteins AT2G36910 30.070 6.85e-22 101