Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1206 ATGGAGAAGGAGAAGAAGCTCTGTTTTGTGAGAAATGGTGATCTTAGATTACCACCTGGGTTTCGATTTCACCCAACAGACGAAGAACTTGTGGTCCAATACTTGAAGTGCAAGGTTTTCTCTTATCCTTTGCCTGCTTCAATCATCCCAGAAGTTCATGTTTGCAAATCAGATCCTTGGGACTTGCCAGGTGATATGGAACAGGAGAGATATTTCTTCAGTACCAGAGAAGCTAAATACTCCAATGGAAGCCGATCCAACAGAGCAACGCATTCTGGGTATTGGAAAGCCACTGGTTTGGACAAGCAAATTCTGAGTTCTAAGGGAAATCAAGTCGTCGGCATGAAGAAAACTCTGGTATTCTACAGAGGCAAGCCTCCTCATGGCTCTCGAACCGATTGGATCATGCACGAATATCGCCTTCATAATATACAGAGCTCTGTGGTGGGGATGCAGAATTGGGTTTTGTGTAGAATATTCTTGAAGAGAAGAAGCACGAGTGGTAAGAATGAGGAACAGAGCAGTTTCAGAGTGAGGAGGGAGATGAACAGTCACAACAAGGTGATGATGAACAACAAGACAAGGCCGGTGTTTTATGACTTCTTGGCACAGAGCAACAAGAACAACAACAATAATACAACAACTGATTTGAATCGCACACCTCATACGACGTCGTCGACCTCAAGCATCAGTGGAATCACACATCTCTCTTCTTACGACTCTGATGAGCGTGAAGAAAGCAGTAGTTGCAACAGCTTGCCGTCTCTTACAAGAAACCCGTGA 783 0.4432 MEKEKKLCFVRNGDLRLPPGFRFHPTDEELVVQYLKCKVFSYPLPASIIPEVHVCKSDPWDLPGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILSSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNIQSSVVGMQNWVLCRIFLKRRSTSGKNEEQSSFRVRREMNSHNKVMMNNKTRPVFYDFLAQSNKNNNNNTTTDLNRTPHTTSSTSSISGITHLSSYDSDEREESSSCNSLPSLTRNP 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1206 260 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 221 - -
Lele24g1206 260 MobiDBLite consensus disorder prediction 209 260 - -
Lele24g1206 260 MobiDBLite consensus disorder prediction 209 237 - -
Lele24g1206 260 Pfam No apical meristem (NAM) protein 18 141 IPR003441 GO:0003677|GO:0006355
Lele24g1206 260 Gene3D NAC domain 26 167 IPR036093 GO:0003677|GO:0006355
Lele24g1206 260 ProSiteProfiles NAC domain profile. 17 162 IPR003441 GO:0003677|GO:0006355
Lele24g1206 260 SUPERFAMILY NAC domain 12 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1206 Lele-ChrLele24 15282620 15283588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1206 9 253 NAC Transcription Factor Family AT5G13180 58.824 7.43e-100 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele24g1206 NAM 1.4e-35 No_clan