Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1194 ATGAGAGGAAGCAGAAACAGAGGGGTGTTTAGTGTTGGTATGTGTGGGCAAGAAGAGCTTGAATTCTCCAGAGATGGTAGCCAATACAGTCTCTCTACCGGCATATTACCTTCTCTTGGTGCTAGGAGCAACCGTCGGAATATCCTTCGACCGTTCATTATTTCCCCCTACGACCGCCGTTACAGGGCATGGCAAACTTTTTTGGTGATTCTGGTCATTTACACCGCTTGGGTGTCGCCTTTTGAGTTTGGATTCCTCAAGGAACCAGTAACACCACTCGCCATTACAGACAACGTTGTCAACGGATTCTTCGCAATCGACATAATTCTCACCTTCTTCGTTGCTTATCTTGACAGAGCTTCCTACTTATTAGTCGATAGCCACAAAAGAATCGCCTGGAAATACACAAGTTCTTGGCTTGTCTTTGATGTCATCTCCACTATCCCTTCAGAACTCGCTCGCAAAATCTCCCCTTCGCCTCTTAAATCCTATGGATTCTTCAACATGCTTCGCCTCTGGCGTCTACGAAGAGTCAGCGCTCTGTTTTCTAGATTGGAGAAGGACAAGGACTATAACTATTTCTGGGTTCGTTGTGTTAAGCTTATATGTGTTACACTTTTTGCTGTTCACTGTGCTGGATGCTTCTATTATCTTCTTGCTGCTCGGTATCATGATCCCCAAAAGACATGGATAGGAGTACAAATGGGGAATTTTGAGGAACAAAGCTTGGGTTCAAGATATGTGATTACTATATACTGGTCTATTACAACCTTAACAACTGTTGGCTATGGAGATTTGCATCCAGTGAATTCAAGGGAGATGATCTTTGACATCTTTTATATGCTCTTTAACCTTGGATTAACCGCGTATTTGATCGGTAACATGACCAATCTCGTCGTCCATTTTACAAGTCGAACCAGACAATTCAGGGATACAATACAAGCTGCGGCAAGCTTTGCACAGAGGAATCGATTGCCGGTTCGTCTGCAAGATCAGATGCTTGCACATTTGTGTTTGAAGTTCAGAACAGATTCGGAGGGATTACAGCAACAGGAGACACTTGATTCACTTCCTAAAGCCATAAGATCAAGCATTTCTCATTATCTCTTCTATTCTGTGGTGGATAAGGTTTATTTATTTCGTGGGGTCTCAAATGACTTGCTTTTCCAGCTGGTCTCGGAAATGAAAGCTGAGTATTTTCCTCCTAAAGAAGATGTCATCTTGCAGAATGAAGCTCCCACAGATTTCTACATTCTAGCAACTGGTTCTGTGGAGTTGTTAGTTATGAAAAATGGGGTAGAGCAAGTCGTGGGAGAGGCAACCGCTGGTGATCTTTGTGGTGAAATAGGGGTCCTCTGTTACAGGCCACAACTCTTCACCGTGCGAACCAAGCGACTGAGCCAACTTCTCCGGCTGAACCGCGCCACCTTCCTGAACATTGTGCAGGCCAATGTCGGAGACGGAACCATAATCATGAACAACCTTCTTGAGCATTTGAAGGAGCAGAGTGACCCAATCATGAAGGGAGTGTTGGTGGAGACAGAGAACATGCTGGCTCGTGGAAGGATGGACCTACCACTCAGCCTTTGCTTCGCTGCTCTCAGAGGAGACGACTTAATGTTGCATCAGTTGTTGAAACGAGGCTTGGATCCTAATGAATCCGACAACAATGGAAGAACTGCTCTCCATATTGCAGCATCTAAAGGAAGTGAGAACTGTGCTTTGCTTCTATTGGATTATGGGGCTGATCCCAACGTAAGAGATAGTGAAGGGATTGTACCACTATGGGAAGCAATATTGGGTCGTCACCTACCAGTTGTGAAGCTGTTAGCAGAAAATGGAGCTTCCTTGAAATTCGGAGATGTGGGTAATTTCGCATGCACTGCAGTAGAACAAAACAACCTTAGCTTGCTCAAGGACATAGTACGATATGGAGATGTCACAATTCCCAGAAACCACAACGGAACCACCGCGCTCCATGTGGCGGTCTCCGAAGCCAACGTTGAGATTGTCAAGTTCTTGCTGGATCATGGCTCTGACATAGACAAACAAGACAAGGAAGGTTGGAGCCCAAGAGAGCTTGCAGACCAACAAGGTCACGAAGAAATCAAAGCTATTTTCGCTTCCACACGGGAGACCAAACCTCAATCTGTTGTATCCATTCCTGAGAAACAGAATACAAAGATAAGGTACCTAGGGAGGTTCACTAGTGAGCCATCCATGCCCATGGCCCCACACGACGGGCCAGTTTCAAGTAACAACCGGTCATGGGGCGTCCAGAGCAGGCCGAGGAGGAGGACGAATAATTATCATAATTCTCTGTTCGGGATCATGTCGGCTGCTCACAAGGGGGAGAACATGGAGGATTTTATGTTTGGCGCTAATAATAATAAGGAGCAATGTACGAGGAATGATGTTTATAATGGAGGAGGGTGTTTAGCTTCTAGAGTTACTATTACATGTCCGGAGAAAGGTGAAGTTGGAGGGAGGCTTGTGTTGTTGCCTAAGAATCTCAAGGAGCTGATTGAGATTGGTGTTAACAAATTTGGATTGCTTCAGGATAATGTCAAGGTTCTGAACAAAGATGGGGCTCAGATTGATGATATTGATGTTGTTAGAGATGGTGATCAACTTGTTTTTGTCTCTGCTGGTGGTCTCGTACGTCATTCTAGTTACTAA 2679 0.4502 MRGSRNRGVFSVGMCGQEELEFSRDGSQYSLSTGILPSLGARSNRRNILRPFIISPYDRRYRAWQTFLVILVIYTAWVSPFEFGFLKEPVTPLAITDNVVNGFFAIDIILTFFVAYLDRASYLLVDSHKRIAWKYTSSWLVFDVISTIPSELARKISPSPLKSYGFFNMLRLWRLRRVSALFSRLEKDKDYNYFWVRCVKLICVTLFAVHCAGCFYYLLAARYHDPQKTWIGVQMGNFEEQSLGSRYVITIYWSITTLTTVGYGDLHPVNSREMIFDIFYMLFNLGLTAYLIGNMTNLVVHFTSRTRQFRDTIQAAASFAQRNRLPVRLQDQMLAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSVVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDVILQNEAPTDFYILATGSVELLVMKNGVEQVVGEATAGDLCGEIGVLCYRPQLFTVRTKRLSQLLRLNRATFLNIVQANVGDGTIIMNNLLEHLKEQSDPIMKGVLVETENMLARGRMDLPLSLCFAALRGDDLMLHQLLKRGLDPNESDNNGRTALHIAASKGSENCALLLLDYGADPNVRDSEGIVPLWEAILGRHLPVVKLLAENGASLKFGDVGNFACTAVEQNNLSLLKDIVRYGDVTIPRNHNGTTALHVAVSEANVEIVKFLLDHGSDIDKQDKEGWSPRELADQQGHEEIKAIFASTRETKPQSVVSIPEKQNTKIRYLGRFTSEPSMPMAPHDGPVSSNNRSWGVQSRPRRRTNNYHNSLFGIMSAAHKGENMEDFMFGANNNKEQCTRNDVYNGGGCLASRVTITCPEKGEVGGRLVLLPKNLKELIEIGVNKFGLLQDNVKVLNKDGAQIDDIDVVRDGDQLVFVSAGGLVRHSSY 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1194 892 SMART cnmp_10 379 496 IPR000595 -
Lele24g1194 892 MobiDBLite consensus disorder prediction 747 765 - -
Lele24g1194 892 PANTHER POTASSIUM CHANNEL AKT1 27 882 IPR045319 GO:0005249|GO:0006813
Lele24g1194 892 SUPERFAMILY Ankyrin repeat 528 708 IPR036770 -
Lele24g1194 892 ProSiteProfiles Ankyrin repeat profile. 557 589 IPR002110 GO:0005515
Lele24g1194 892 Gene3D - 525 708 IPR036770 -
Lele24g1194 892 ProSiteProfiles Ankyrin repeat region circular profile. 557 588 - -
Lele24g1194 892 SUPERFAMILY Voltage-gated potassium channels 56 300 - -
Lele24g1194 892 Pfam KHA, dimerisation domain of potassium ion channel 816 880 IPR021789 -
Lele24g1194 892 Gene3D Jelly Rolls 343 505 IPR014710 -
Lele24g1194 892 SUPERFAMILY cAMP-binding domain-like 304 499 IPR018490 -
Lele24g1194 892 ProSiteProfiles Ankyrin repeat region circular profile. 654 686 - -
Lele24g1194 892 SMART ANK_2a 524 553 IPR002110 GO:0005515
Lele24g1194 892 SMART ANK_2a 654 683 IPR002110 GO:0005515
Lele24g1194 892 SMART ANK_2a 590 619 IPR002110 GO:0005515
Lele24g1194 892 SMART ANK_2a 557 586 IPR002110 GO:0005515
Lele24g1194 892 Pfam Ion transport protein 62 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele24g1194 892 ProSiteProfiles Ankyrin repeat profile. 654 686 IPR002110 GO:0005515
Lele24g1194 892 Gene3D - 63 301 - -
Lele24g1194 892 FunFam Potassium channel KAT3 63 301 - -
Lele24g1194 892 ProSiteProfiles KHA domain profile. 816 892 IPR021789 -
Lele24g1194 892 PRINTS Ankyrin repeat signature 670 684 IPR002110 GO:0005515
Lele24g1194 892 PRINTS Ankyrin repeat signature 558 573 IPR002110 GO:0005515
Lele24g1194 892 ProSiteProfiles Ankyrin repeat profile. 590 622 IPR002110 GO:0005515
Lele24g1194 892 MobiDBLite consensus disorder prediction 737 765 - -
Lele24g1194 892 Pfam Cyclic nucleotide-binding domain 399 483 IPR000595 -
Lele24g1194 892 Pfam Ankyrin repeats (3 copies) 629 703 IPR002110 GO:0005515
Lele24g1194 892 Pfam Ankyrin repeats (3 copies) 529 618 IPR002110 GO:0005515
Lele24g1194 892 FunFam Potassium channel KAT2 367 503 - -
Lele24g1194 892 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele24g1194 892 PRINTS EAG/ELK/ERG potassium channel family signature 97 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele24g1194 892 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele24g1194 892 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele24g1194 892 PRINTS EAG/ELK/ERG potassium channel family signature 74 81 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele24g1194 892 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele24g1194 892 CDD CAP_ED 379 484 IPR000595 -
Lele24g1194 892 ProSiteProfiles cAMP/cGMP binding motif profile. 379 481 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1194 Lele-ChrLele24 14015623 14024337 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1194 21 880 Ion Channels AT2G25600 63.291 0.0 1112