Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1183 ATGGTTTCCAAAAAAGACAGTTACTCATATTATACAAAGGAGTTTTCTACTTTACTCTTGCTGTTATTATTTTGCTTCCAGCATACTACTGTTGAGTGCCAGGGAAGGTTGAGTAAGCAGAACTATTCAGAATCAGAGACTGAGTATCCATCAAGGCCTTCACAAGACAAGGAAGACTTCCGCAAGATTATCATAAGCGTTGTTTTAGGAGCAGTCACTGGATTAGTTGGCTCCGTTTTGTTTGCTCTTATAGTCCGTTGCTTTGTTCAGTACTTGAATCGAACCCCAATACTCAAGGGGCCCGTCATATTTTACCCGAAAATTTCTCCCAAGACACTCCAATCAGCGTTGGCTAAAGAAAACCATTTACTTGGTTCAAGCCTAAACGGCAAATGTTACAGAACGGTGCTTGACAATGGGCTCACAATTGCAGTCAAGAAGTTAACACCCTTTGAAAGCGGTTCACCAGAGATTAGGAAAAAGAGGGTTAAGAGAGAAATACAGAAGGAGCTGGAAGTGCTTGCTAGTCTAAGACATCGGAATTTGATGAGCCTACGGGCCTATGTTCGTGAACCTGACAGTTTTTCCTTGGTTTATGATTATGTAGCCAAGGGGAGCCTTGCTGATGCCATGAACAGAGCTAAGGAAAGCGAGCTGCCGCTTGGTTGGGAAGTTAGGCTAAGGATTGCTATTGGGGTGGTTAAGGGACTTCGGTATCTTCACTATATTTGTGTACCTCGGATTCTGCACTACAACCTTAAGCCCACCAATGTAATGTTGGATGCTGAGTTCGAACCTAGGTTGTCTGATTATGGATTGATTAAACTTCTACCCGACTTGAATAGAGCCACATCTCCCTACACTCCTCCTGAATGCTTCCATAATTGCAGCAGGTTCAGTGACAAAAGTGACATATTCAGTTTTGGGATGATCTTGGGTGTATTATTAACTGGAAGGGACCCAGGAGATGCATTCTTTGACGAAGCGGGGAATGGAGGGAGCATGGGATGTTGGCTCAAGCAGTTGCAGCAAGCAGGAGATACCAAGGAAGCGCTCGATAAGAGCATCATCGCCAGGGAAGGGGACGAAGATGATATGCTCATGGCTGTCAGAGTCGCAGCCGCGTGCCTCTCAGACATGCCTGCAGATAGGCCTTCCAGCGATGAACTTGTTCATGTGCTCACGCAACTTCACAGTTTTTGA 1203 0.4505 MVSKKDSYSYYTKEFSTLLLLLLFCFQHTTVECQGRLSKQNYSESETEYPSRPSQDKEDFRKIIISVVLGAVTGLVGSVLFALIVRCFVQYLNRTPILKGPVIFYPKISPKTLQSALAKENHLLGSSLNGKCYRTVLDNGLTIAVKKLTPFESGSPEIRKKRVKREIQKELEVLASLRHRNLMSLRAYVREPDSFSLVYDYVAKGSLADAMNRAKESELPLGWEVRLRIAIGVVKGLRYLHYICVPRILHYNLKPTNVMLDAEFEPRLSDYGLIKLLPDLNRATSPYTPPECFHNCSRFSDKSDIFSFGMILGVLLTGRDPGDAFFDEAGNGGSMGCWLKQLQQAGDTKEALDKSIIAREGDEDDMLMAVRVAAACLSDMPADRPSSDELVHVLTQLHSF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1183 400 Gene3D Phosphorylase Kinase; domain 1 103 201 - -
Lele24g1183 400 SUPERFAMILY Protein kinase-like (PK-like) 121 394 IPR011009 -
Lele24g1183 400 Gene3D Transferase(Phosphotransferase) domain 1 202 399 - -
Lele24g1183 400 Pfam Protein kinase domain 120 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1183 400 ProSiteProfiles Protein kinase domain profile. 118 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1183 400 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 32 395 - -
Lele24g1183 400 Coils Coil 160 180 - -
Lele24g1183 400 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 110 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1183 Lele-ChrLele24 11884039 11885776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1183 64 397 Receptor kinase-like Gene Family AT2G31880 33.239 3.80e-58 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Lele24g1183 Pkinase 6.1e-30 CL0016