Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1157 ATGGCCCCCATAACTCTGTTCTTACTATTTGCAGTTCTATCTGCAAACCAAGTTAAGGCTCAAAGAAATGATTCCCACATCATAACTTTGGGTTCTTCTCTCTCCCCAAAAACGAATTCTACTTCATGGGTGTCACCGTCTGGTCTTTTTTCCTTCGGATTTCATCGACAAAATAATGGCTTTGCTGTTGGAATACGGCTCAAGGATGAACATGAAGGAACAATCGTTTGGACAACTGACGACTTGAACAATCTATCTGCTTCCCTTGATTCAGTAATCGAATTTACCAAAGATGGTCAAATTGTGCTTAGAAACGAGAAACAGACGGAAGTAGTCATTGCTAGTGCGTCTGAACCTGCAGATTCAGCATCTATGCTTGATTTTGGGAATTTTGTTCTTTATAGTAAAAACCATAGTGTCATCTGGCAAAGCTTTGATTACCCCACCGACACCATATTAGGAGGTCAGAATTTATCGTCGGACCAAAATCTCACCTCTGCAAATAGACATTTTATTCTCAGAATGGATCCGTATGAAGAAGATTTTGTTACCAATCCTGAACACAATAAAACAGGAGATGATATTTACTGGGCCTCAGATAATTCTCAATCATTTGATGAGTGGCCACACCCCTCACAGCTTACTCTTAATCGTACAGGCTTTCTTTGCCTAATTGATGATGATGGGAATACCACCAAGGTTCTGGCCAATAGTAGCAACTATCTTGGAATGACCACAAGCTTAATCTATCGTGCAACATTGGATTTCGATGGTATTTTTAGATTGTATGTTCACACATTTGAGAAGAATCCAGCTAGCTTCAATGTTGAACATGTGTGGCAATCTGTGTCTAATCAATGTGAAGTCAAGGGCCTTTGTGGTTTCAACAGTTATTGCTCCATGAATGGCAATAAAGCAGTTTGTGAGTGTTACCCTGGATTCATGCCCATAATTAATGGGAATAATAATAAAAGCATGTTCTTGGACTGCGAACAAAGAAAAAAAGGTGACTGTAAAACTAGTGAAGATCAAAACATGTTGTACGATGTTGTTCCCTTAAGAGGCGTGCAATTGGGCCTTATTCCTTATTTGGTCATACCATTGGAAATGGAAGCTTGCCGGAAGTCTTGCCAAGAAGACTGTGATTGTGGGGCAGCATTACATGAAGATGGCCTTTGCAAGAAGTATGGGCTTCCGCTTAGATATGGCAGAATTAATCGGAGTGTATCAACCACAGGCTTCTTCAAGTTGCCTTCAAAAATAATCATTACTCCAAATCCAAAGAAGACAGCAGAGGTTCGTGTTGATGACAAGAAAAGTCTGATTTTAACTCTGGCCATCACTCTTGGTTCGATTTCATTCCTTTGCTTAGTCTTTGCAATATCTATTTTCCTCATCTACATGATTAAAGTCTATTCACACGCAAAGCTCTCTGCCAGTAGGGAAAGTTTGGGGTTTGCTGAGGATTGTAGTTTACGAACATTTGCCTTTGATGAATTGGTGAATTCAACGGGAAACTTCACAGAAGAGATTGGTAGAGGATCTTTTGGGGTGGTTTACAAGGGCACAATTCAAGGAAATAATAGAAGTATAGCTGTGAAGAAACTAGACATAGTTGTTGATGAAGAAAGAGAATTTAAAGCTGAAATCACTGCAATCGCTCAAACTCATCACAGGAATTTGGTTCAGCTAGTTGGTTATTGCATCGATGGATCAACAAAGCTTCTTGTTTATGAATATATGAGCAATGGATCTCTAGCAGATTTTCTGTTCAAGGCTGAGATGCGTCTATCTTGGAAACAAAGAGTCAAAATTGCATTGGATGTAGCAAGAGGAGTTCTATATCTACACGAAGAATGTGAAGTTTGTATTGTGCACTGCAATATCAAGCCTCGTAATATTCTCTTGGATGAAATTTGGACAGCAAAAATATCTGATTTTGGACTTGCAAGGCTATCAATGCCAGAACATTCAAGAATCAGAAGTACCAATGAATTAACAAGTGGCTATATGGCACCTGAACGGCAGAGAGATGCAATGACATCTGTTAAGGTTGACGTCTACAGCTATGGCGTGGTGCTGTTGGAGATCATATGTTGCAGAAGGAACATAGATGTGAAAGTTGCTTCAGAAGAGGAAATGATGCTTTCAAGTTGGGTGTATAATTGCTTTGTGAAAGGGGAGTTGAAGAAACTAGTAGTGGATGAAGATGTAGAATGGAGGACATTGGAGAGAATGGTGAAGGTGGCTTTATGGTGTGTCCAAGAAGACTTGTCTCTACGTCCTTCCATGAAGAATGTGATACTCATGTTGGAAGGGTTAAAAGATATCCCAGTTCCTCCATCTCCAATCCCCCTGGCTTGA 2364 0.3997 MAPITLFLLFAVLSANQVKAQRNDSHIITLGSSLSPKTNSTSWVSPSGLFSFGFHRQNNGFAVGIRLKDEHEGTIVWTTDDLNNLSASLDSVIEFTKDGQIVLRNEKQTEVVIASASEPADSASMLDFGNFVLYSKNHSVIWQSFDYPTDTILGGQNLSSDQNLTSANRHFILRMDPYEEDFVTNPEHNKTGDDIYWASDNSQSFDEWPHPSQLTLNRTGFLCLIDDDGNTTKVLANSSNYLGMTTSLIYRATLDFDGIFRLYVHTFEKNPASFNVEHVWQSVSNQCEVKGLCGFNSYCSMNGNKAVCECYPGFMPIINGNNNKSMFLDCEQRKKGDCKTSEDQNMLYDVVPLRGVQLGLIPYLVIPLEMEACRKSCQEDCDCGAALHEDGLCKKYGLPLRYGRINRSVSTTGFFKLPSKIIITPNPKKTAEVRVDDKKSLILTLAITLGSISFLCLVFAISIFLIYMIKVYSHAKLSASRESLGFAEDCSLRTFAFDELVNSTGNFTEEIGRGSFGVVYKGTIQGNNRSIAVKKLDIVVDEEREFKAEITAIAQTHHRNLVQLVGYCIDGSTKLLVYEYMSNGSLADFLFKAEMRLSWKQRVKIALDVARGVLYLHEECEVCIVHCNIKPRNILLDEIWTAKISDFGLARLSMPEHSRIRSTNELTSGYMAPERQRDAMTSVKVDVYSYGVVLLEIICCRRNIDVKVASEEEMMLSSWVYNCFVKGELKKLVVDEDVEWRTLERMVKVALWCVQEDLSLRPSMKNVILMLEGLKDIPVPPSPIPLA 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1157 787 Gene3D Phosphorylase Kinase; domain 1 470 580 - -
Lele24g1157 787 PIRSF SRK 1 787 IPR024171 GO:0004674
Lele24g1157 787 Gene3D - 148 290 IPR036426 -
Lele24g1157 787 Gene3D Transferase(Phosphotransferase) domain 1 581 778 - -
Lele24g1157 787 SMART blect_4 34 148 IPR001480 -
Lele24g1157 787 ProSitePatterns Protein kinases ATP-binding region signature. 511 535 IPR017441 GO:0005524
Lele24g1157 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 200 IPR036426 -
Lele24g1157 787 Pfam Protein tyrosine and serine/threonine kinase 507 768 IPR001245 GO:0004672|GO:0006468
Lele24g1157 787 Gene3D - 22 147 IPR036426 -
Lele24g1157 787 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Lele24g1157 787 ProSiteProfiles Protein kinase domain profile. 505 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1157 787 ProSiteProfiles Bulb-type lectin domain profile. 149 275 IPR001480 -
Lele24g1157 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 779 - -
Lele24g1157 787 Pfam D-mannose binding lectin 74 164 IPR001480 -
Lele24g1157 787 Pfam S-locus glycoprotein domain 240 316 IPR000858 GO:0048544
Lele24g1157 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 782 - -
Lele24g1157 787 CDD STKc_IRAK 511 774 - -
Lele24g1157 787 FunFam S-receptor-like serine/threonine-protein kinase 474 580 - -
Lele24g1157 787 SUPERFAMILY Protein kinase-like (PK-like) 490 772 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1157 Lele-ChrLele24 9964453 9966816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1157 436 787 Receptor kinase-like Gene Family AT5G10530 34.247 2.35e-60 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele24g1157 PK_Tyr_Ser-Thr 5.7e-47 CL0016