Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1155 ATGGCTACCAGTGCATCAAACATATACTTTCTTCTATTACTATCTTTTCTATGCGGAAGATTTGAAATATTATCTGCAAAAACAATACCACTCGGCGATTCAATTCATCCCACTTCATCATGGCCTTCACCTTCTGGTCGATTTGCATTTGGCTTTTACGAGCAAGGCAATGGCTTCAAAGTTGGAATTTGGCTACTTGATGGGTTGGATAAAACAATCGTCTGGACTGCAAATCGTGATGATGCTCCTGTCTCCTCAAATGCAACGCTTGTTCTAACCATGGGAGGCGAGCTTCTTCTGCAAACAGGTGATCCAGGGAAAGAGAACAAGATTATTAATGCTCATAGTAACAATGGAACTGTTTCGTCTGCTTCCATGCTTGATTCTGGAAACTTTGTTCTGCAAAACAAAAGCCAGTTCCTTTGGCAGAGTTTCGATCACCCAACTGATACTATGTTAGGGGGTCAAATTCTACCTTCTGGGCATCAATTGGTATCTAGTTCATCAGATAACAACCAATCTTCTGGAAGGTTTCAACTCTCGATGCAAGCTGATGGAAACCTTGTTTTATATCCACGATATTCTGTTCACACAAGATGGGATGCTTACTGGACGTATCCTGAACGTGATTATGACACTAATTTCAAATATTATCTTTTCCTCAACAACTCAGATCCTTATGAGCCTCTATGTGCTGTAAATGCCAGTAGTTCCAACTCAGAACTACTTTGGTGTTGTTCGTATCCTATCAGCAGCTTCAAAGGAAACAACCCTATTTATCGAGCCACTATTCATTCTGATGGAATTTTACGACTCTACGCTCATTTTGAAGACACAAATCGGCAACATCAAGTTAAGAAGGTGTGGTCGCCCAATGATTGCGACGAACTTTGTCAGGTGAAGTCTTTTTGTGGATTCAACAGCTATTGTACCTATGATGACAACGAGCCTTCTTGCAAATGTCTTCCCGGAACTGATTTTATAGACCCAAGTCATCAGAATCTTGGATGCGAAAGGAACTTCTTAGAAGCAGAATGTAAAGGTGGTGGGAAAGAAAATACAACTTTTTATCACATGTCCAACATGACTAGTATGACCATGGAAGATCTTCCTTATACAGAGGAAGAAATTCAGGAGGAGGACTGCCCATCTTCTTGTTTGCAAGATTGTTACTGTGGAGCTGCCTTCTATAGTAGACTTGATTTGTGTAACAAACTAAAGCTTCCTTTAAGATATGTTACAAGAGAAACAGTTCGGCCGTCCTACACAGTATACTTCAAGGTGGGAATTCAAAGCCTCAAAAGCGACAATACGTCTTCCATCAAGACCATCATCAGTAAGAAAGCAATTGTGCAGATCATCGTTGTCGTCTTTGGTTTTGCTATTCTTTTGTGTTCAGCTGTTGCAATCTCTAGCCAATTTATATACAAGATTGGAGTTTTACGTTACAAGAGGTTGTTGGAGATGGGAGATTTGGGCTTGAATGAAGGGATTACTCTGAGGGTATTCTCATACAATGAGCTGAAAAAGGCAACGAGTGGTTTCAAACAAGAGGTGGGTAAGGGCTCCTTCGGATCAGTTTACAGAGGAAGTTTACACAAAGGAAGAAAATTGATTGCTGTAAAAAGGCTACACAAGTTCATTGAAGATGGAGAGAGAGAATTTCGAGCTGAAATGCAAGCCATTGGGAAAACCCACCACAAGAACTTAGTTCGCTTGCTGGGATATTGTGCAGAGGGATCTAAAAGACTTCTTGTTTATGAGTACATGAGCAATGGCTCCCTTGACAAGTTTATCTTCGGAGACAGCACTATTCGTCCAGATTGGGATGAGAGAAGAAGAATAGCACTCGACATTGCGAGAGGGTTATTGTATCTCCATGAACAATGTGGGGCTCCCATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGTTTTTTACAGCTAAAATATCAGACTTTGGGTTAGCTAAACTTCTGATGCCGGATCAAACAAGAACATTCACTCAAGTGAGAGGGACAAGAGGTTATTTGGCGCCAGAATGGAATAAGAACACCCCGATAACAGTGAAAGCAGATGTTTACAGCTACGGAGTTATGCTATTGGAGATTGTGTTTTGCAGAAGAAGCTTGGTGGTTAACATGTTGAATCCAGAGCAAATTGTTCTCTCCAATTGGGTGTACAAGTGTTTTGTTCGGCACGAGTTAAACAAGCTTGTTGTTGGGGAAGAAGTGGATAATACGTTGCTGGAGAATATGGTGAAAGTGGGGTTATGGTGTATTCAAGATGAAGCTTTTCTGCGGCCATCAATGAAGAGTGTGGTGTTGATGCTTGAAGGAGTTACGGAGGTGGCTATTCCTCCTTGTCCATCTCCTGATTCTACATGA 2397 0.4118 MATSASNIYFLLLLSFLCGRFEILSAKTIPLGDSIHPTSSWPSPSGRFAFGFYEQGNGFKVGIWLLDGLDKTIVWTANRDDAPVSSNATLVLTMGGELLLQTGDPGKENKIINAHSNNGTVSSASMLDSGNFVLQNKSQFLWQSFDHPTDTMLGGQILPSGHQLVSSSSDNNQSSGRFQLSMQADGNLVLYPRYSVHTRWDAYWTYPERDYDTNFKYYLFLNNSDPYEPLCAVNASSSNSELLWCCSYPISSFKGNNPIYRATIHSDGILRLYAHFEDTNRQHQVKKVWSPNDCDELCQVKSFCGFNSYCTYDDNEPSCKCLPGTDFIDPSHQNLGCERNFLEAECKGGGKENTTFYHMSNMTSMTMEDLPYTEEEIQEEDCPSSCLQDCYCGAAFYSRLDLCNKLKLPLRYVTRETVRPSYTVYFKVGIQSLKSDNTSSIKTIISKKAIVQIIVVVFGFAILLCSAVAISSQFIYKIGVLRYKRLLEMGDLGLNEGITLRVFSYNELKKATSGFKQEVGKGSFGSVYRGSLHKGRKLIAVKRLHKFIEDGEREFRAEMQAIGKTHHKNLVRLLGYCAEGSKRLLVYEYMSNGSLDKFIFGDSTIRPDWDERRRIALDIARGLLYLHEQCGAPIIHCDIKPQNILMDEFFTAKISDFGLAKLLMPDQTRTFTQVRGTRGYLAPEWNKNTPITVKADVYSYGVMLLEIVFCRRSLVVNMLNPEQIVLSNWVYKCFVRHELNKLVVGEEVDNTLLENMVKVGLWCIQDEAFLRPSMKSVVLMLEGVTEVAIPPCPSPDST 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1155 798 ProSiteProfiles Protein kinase domain profile. 513 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1155 798 SMART serkin_6 513 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1155 798 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Lele24g1155 798 Pfam Protein kinase domain 516 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1155 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Lele24g1155 798 SMART blect_4 28 148 IPR001480 -
Lele24g1155 798 CDD B_lectin 43 148 IPR001480 -
Lele24g1155 798 Gene3D Phosphorylase Kinase; domain 1 491 589 - -
Lele24g1155 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 204 IPR036426 -
Lele24g1155 798 FunFam S-receptor-like serine/threonine-protein kinase 488 589 - -
Lele24g1155 798 Gene3D - 149 297 - -
Lele24g1155 798 FunFam Putative receptor-like protein kinase 590 789 - -
Lele24g1155 798 CDD STKc_IRAK 519 783 - -
Lele24g1155 798 SUPERFAMILY Protein kinase-like (PK-like) 498 782 IPR011009 -
Lele24g1155 798 PIRSF SRK 1 798 IPR024171 GO:0004674
Lele24g1155 798 Pfam D-mannose binding lectin 72 156 IPR001480 -
Lele24g1155 798 Gene3D Transferase(Phosphotransferase) domain 1 590 788 - -
Lele24g1155 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 794 - -
Lele24g1155 798 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Lele24g1155 798 Gene3D - 23 146 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1155 Lele-ChrLele24 9911505 9913901 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1155 503 791 Receptor kinase-like Gene Family AT5G20050 42.718 8.74e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele24g1155 Pkinase 4.7e-48 CL0016