Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1112 ATGACAAAGAAGCTAGCAAGTATGAGCACCACCATAGAGAATCATGAATATGATATTGATTATTCTCTTAATGCTATGATGCTACCATCTGGTCACATCTACCTTGCTGTATTAAATGCTGCCATTGAACTCAACTTGTTTGAGATCATTGGTAAGGGAAGTCCAGAGGGCGTGTCACCTTCTGAAATCATTTACAAGCTTCCAAATACACACGCGGGTGCCAGTCTCAATCATCGCCTTGATAGGATTCTGCTTCTGCTTGCTAATTGCTCCTTATTGACTTGTTCTTACTCCATGAAACTTGATCAATATAATGAAGCAATTGTTGATGTAGCTGGTGGCATTGGCCAAAGCCTCCAAATGATAATTTCCAAGTATCCTTCAATTAAAGGCATTAACTTTGACTTGCCACAAGTGGTACAACATGCACTATCCCATCCAGGAATGACATATGTTGGAGGAGATATGTTCAAAAGTGTCCCTCAAGGAGATGCTTTAATGATCAAGACTACAACTCATAACTAG 525 0.3981 MTKKLASMSTTIENHEYDIDYSLNAMMLPSGHIYLAVLNAAIELNLFEIIGKGSPEGVSPSEIIYKLPNTHAGASLNHRLDRILLLLANCSLLTCSYSMKLDQYNEAIVDVAGGIGQSLQMIISKYPSIKGINFDLPQVVQHALSHPGMTYVGGDMFKSVPQGDALMIKTTTHN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1112 174 Pfam O-methyltransferase domain 106 173 IPR001077 GO:0008171
Lele24g1112 174 PANTHER O-METHYLTRANSFERASE 107 174 IPR016461 GO:0008168
Lele24g1112 174 Gene3D - 35 102 IPR036388 -
Lele24g1112 174 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 105 173 IPR029063 -
Lele24g1112 174 Pfam Dimerisation domain 37 88 IPR012967 GO:0046983
Lele24g1112 174 SUPERFAMILY "Winged helix" DNA-binding domain 20 97 IPR036390 -
Lele24g1112 174 Gene3D Vaccinia Virus protein VP39 106 174 IPR029063 -
Lele24g1112 174 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 174 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1112 Lele-ChrLele24 8807565 8809473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1112 18 96 Monolignol Biosynthesis Gene Families AT5G54160 46.250 8.69e-10 54.7