Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1109 ATGAGTTCCACCATTGAGAGTCATGAATATGATTCTAAGTCCTCTTTTAATCCTACGGTATTGCCAGGTGATCATGTTTACCTTGCAGTGTTAAAAGCTGCTATTGAGCTGAACTTATTTGAGATCATTGATAAGGGAAGCTCTAAAGGCATGTCCTCCTCTGAAATCTCTTCCAAGCTCCCAAATCCACACGCCAGAATGGCTGATCGACACCGAACGTTATTTTTGCTTTATAATTACTCTCTCTTGACTTGTTCTTCCAACAAACGTTCTTCCAACAAACTTGATCAACATGGTAGGATTGAGAGGCTTTATGTTCGTGGGATGTCTCTGTTTGAATATATAGAAATAGATCCAACATTGAAAACTACTTTTAATAAGGCAATGGCTGATTTGTCAATCGTGCAGATGAAGCAAGTACTTGAAACATATAATGGATTTGAGGGAATATCAACACTTGCTGATGTGGCGGGTGGCATTGGCCGAAACCTCAAAATGATCACCTCCAAGTATCCTTCAATTCAAGGCATTACCTTTGACTTGCCACAAGTGGTCGAACATGTACTATCCCATCCAGTTTATAACTCATAA 591 0.3959 MSSTIESHEYDSKSSFNPTVLPGDHVYLAVLKAAIELNLFEIIDKGSSKGMSSSEISSKLPNPHARMADRHRTLFLLYNYSLLTCSSNKRSSNKLDQHGRIERLYVRGMSLFEYIEIDPTLKTTFNKAMADLSIVQMKQVLETYNGFEGISTLADVAGGIGRNLKMITSKYPSIQGITFDLPQVVEHVLSHPVYNS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1109 196 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 196 IPR016461 GO:0008168
Lele24g1109 196 Gene3D - 26 140 IPR036388 -
Lele24g1109 196 PANTHER O-METHYLTRANSFERASE 28 188 IPR016461 GO:0008168
Lele24g1109 196 Pfam Dimerisation domain 30 66 IPR012967 GO:0046983
Lele24g1109 196 Pfam O-methyltransferase domain 104 191 IPR001077 GO:0008171
Lele24g1109 196 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 100 187 IPR029063 -
Lele24g1109 196 Gene3D Vaccinia Virus protein VP39 122 192 IPR029063 -
Lele24g1109 196 SUPERFAMILY "Winged helix" DNA-binding domain 25 94 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1109 Lele-ChrLele24 8739926 8742285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1109 31 192 Monolignol Biosynthesis Gene Families AT5G54160 40.670 3.14e-38 133