Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1104 ATGGGTATCACTGTTTTGGCTTTTATGCTATTACTGCAGTTGCCAAGAATTTTTGGCTTTGGGGATTTGTTGCATTCAAAGGATTGTGATGCGAATTGGGTAGCCTATTCATATTCTCATGGTCAAGACCTATTTTACATAAACGGGAATGTTGTTAGTAAAGACACTTTCTGCAAGACCCTTCAGTTGTATATGGTAAATGGTTGTGATGCGAAGTACTATTTTGGAAGTGCAAGCTGTGGGCTGGAAGTTTCTTTTGGACGAAAGCTTTTACTGAATGATATAAGCAATAACCCAACATTCCCAGGTCACAAGAACGTTTCTAAGCCCCTATCAGCCTCGAAAGTTGGTATAGCTGCAAGTGGAGTTTTGTTTGTATGTTGTGTTTTTCTCTGTCCTTGTTTCTATGGGAAGAGAAAAAAAGCCACTGCTCATGCTGGTCTATCCAAGGACCCAAATTCAATGGATTCAGCTTCCTCATTGGAAGGGAACTCTGTTTCTGAGAAGACCCAGGGCTCTCTCCATCGGGTACCACCTAGTCCTTCAAGATTTTCAATGTCCCCAAAACTCAGTAGACTTGGGCCAATACATCTCAACTTGAGTCAGGTTTTAAAAGCTACTCATAATTTCTCGAATAAATTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGCTAGAAGGTGGTCAGGTTGTGGCAGTAAAGCGTGCCAAAAGGGAACAATTTGAGAATTTGAAAACTGAATTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACTTGGTGAAGTTACTAGGTTATATTGACCAAGGAAATGAACGCCTTCTTATTGCAGAGTATGTTCCGAATGGCACTCTTAGAGAACATTTGGATGGTTTGCGTGGAAGGATCCTTGACTTCAATCAGCGCCTTGAAATTGCCATTGATGTTGCTCATGGCTTGACCTATCTACATCGTTACGCAGAAAAGCCAATTATCCATAGAGATGTGAAATCATCCAACATTCTTCTAACGGAAAGTATGAGAGCTAAAGTTGCTGATTTTGGATTTGCAAGACTTGGTCCAATGGACTCTGATCAGACACACATCTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGATCCAGATTACATGAAAACATATCAGCTTACTCCCAAGAGCGATGTTTATTCATTTGGAATTTTGCTTTTAGAAATTGTGACCGGCCGCCGTCCTGTGGAGGTGAAGAAACCTGTTGAAGAGAGGGTCACATTGAGATGGGCTTTCAGAAAGTATAACGAAGGAAATGTGGCTGAAATGGCGGATCCTTTAATGGAGGAAGGTGTAAATGGAGATGTTCTGATGAAGATGATTGGTTTAGCCATTCAATGTGCAGCCCCAAGTCGAGCTGATCGTCCTGACATGAAATCGGTGGGAGAACAATTGTGGACAATCAGGGCAGAATTCCTCAAGAGTTCAAAGAGGGTGTGA 1491 0.4172 MGITVLAFMLLLQLPRIFGFGDLLHSKDCDANWVAYSYSHGQDLFYINGNVVSKDTFCKTLQLYMVNGCDAKYYFGSASCGLEVSFGRKLLLNDISNNPTFPGHKNVSKPLSASKVGIAASGVLFVCCVFLCPCFYGKRKKATAHAGLSKDPNSMDSASSLEGNSVSEKTQGSLHRVPPSPSRFSMSPKLSRLGPIHLNLSQVLKATHNFSNKLQIGEGGFGTVYKAQLEGGQVVAVKRAKREQFENLKTEFSSEVELLAKIDHRNLVKLLGYIDQGNERLLIAEYVPNGTLREHLDGLRGRILDFNQRLEIAIDVAHGLTYLHRYAEKPIIHRDVKSSNILLTESMRAKVADFGFARLGPMDSDQTHISTKVKGTVGYLDPDYMKTYQLTPKSDVYSFGILLLEIVTGRRPVEVKKPVEERVTLRWAFRKYNEGNVAEMADPLMEEGVNGDVLMKMIGLAIQCAAPSRADRPDMKSVGEQLWTIRAEFLKSSKRV 496
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1104 496 Gene3D Phosphorylase Kinase; domain 1 182 286 - -
Lele24g1104 496 SMART serkin_6 210 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1104 496 CDD STKc_IRAK 216 482 - -
Lele24g1104 496 Pfam Protein tyrosine and serine/threonine kinase 214 482 IPR001245 GO:0004672|GO:0006468
Lele24g1104 496 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 99 488 - -
Lele24g1104 496 MobiDBLite consensus disorder prediction 146 188 - -
Lele24g1104 496 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 287 496 - -
Lele24g1104 496 ProSitePatterns Protein kinases ATP-binding region signature. 216 238 IPR017441 GO:0005524
Lele24g1104 496 ProSiteProfiles Protein kinase domain profile. 210 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1104 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Lele24g1104 496 SUPERFAMILY Protein kinase-like (PK-like) 192 485 IPR011009 -
Lele24g1104 496 MobiDBLite consensus disorder prediction 150 187 - -
Lele24g1104 496 Gene3D Transferase(Phosphotransferase) domain 1 287 495 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele24g1104 Lele-ChrLele24 8623914 8633104 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1104 116 486 Receptor kinase-like Gene Family AT3G46290 40.212 3.17e-75 251
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele24g1104 PK_Tyr_Ser-Thr 1.6e-48 CL0016