Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1103 ATGTCTGTCCCATTGAGAGCCTTGACTACGAGTCTGATTTTCGAGAACGAGTTATTCAAGCAGGATTGGAGGAGCCGAGGGAAAATTCAGATATTTCAGTACCTTCTCATGAAGTGGGTTTTGTGCTTGTTGATCGGTGCGATTGTTAGCGTTGTTGGATTTTACAATAATCTCGCGGTTGAGAATCTCGCTGGCTTGAAGTTCGTGATTACATCTGACATGATGTTGCAGAGGAGGTTTCTCTTGGCCTTTGTAGTATTTTTTTCTTCGAATTTGGTTCTCACCCTTTTTTCTACTATAATCACGGCTTTTATAGCTCCCGCTGCCATGGGTTCTGGTATACCAGAGGTGAAAGCCTACTTAAATGGGGTAGATGCCCCTGCAATATTTACGCTCAGAACTCTGTTCGTTAAGATTATTGGAAGCATTTCAGCAGTTTCATCATCCCTTCTCATTGGAAAGGCGGGGCCTATGGTGCATGTAGGAGCATGTGTGGGATCATTGTTGGGTCAGGGTGGTTCTAAGAGATATGGCCTAACATGGAAATGGTTACATTTTTTTAAGAACGACCGTGATCGACGGGATCTAATAACATGTGGATCAGCTGCTGGAATTGCTGCAGCCTTCCGTGCCCCAGTTGGTGGGGTGTTGTTTTCTCTTGAAGAGATGGCATCTTGGTGGAGAAGTGCCCTTCTGTGGAGAACTTTCTTCACAACAGCAGTAGTTGCACTTGTGCTTCGTGCATTGATAGATGTTTGTTTAAGCGGTAAATGCGGGCTATTTGGTAAAGGTGGGCTGATAATGTTTGATGTTTATTCAGAAAGTATTTCATATCATCTGGAGGATGTGCCTCCTGCAATAATTCTTGGAGTTATAGGAGGCATACTTGGAAGCTTATATAATGCTCTGTTGAGCAAGGTTCTTCGTATCTACAATATGATCCATGAGAAAGGCATCGCATACAAAATCTTGCTTGCTTGCTTAATCTCCGTCATTACTTCTGGTCTTCTTTACGGATTGCCGTGGTTTGTATCTTGTCGACCTTGTCCAGTTGATGCGACTGAGGAATGTCCTACAATGGACCGCTCTGGTAACTACAAGAAATTCCAATGCCCTCCTGGTCATTACAATGATCTTGCCAGCCTCTTTTTTAACACATGTGGTGATGCTATCAAAAATCTATTTAGCAAAAACACAGACGAGGAGTTTTCATATTCATCGATGTTTATCTTTTTCATCACATGCTTTTTTCTAAGCATCTTTAGCTATGGGGTTGTCGCTCCAGCTGGTCTCTTCGTGCCAAATATCTTGATTGGTGCATCTTACGGGCGTGTGGTTGGCATGTGGATTGGCAAAAATTCCACTTTGAACCATGGCCTTTTTGCTGTATTGGGCGCTGCTTCCTTTCTTGGAGGATCTATGAGAATGACAGTTTCCCTTTGTGTAATCTTACTAGAACTAACAAATAATTTGTTATTGCTACCCTTGATGATGCTGGTCTTTAATGGCATTGAGAAGGTTCGCAACATTGTGTTTGTCCTCAGAACTTCGAGTCATAATGGGTTCCCTGTGGTTGATGAGCCTCCATATTCTGAAGCTCCAGTTTTATATGGTATAATCCTTCGTCAGCATCTTCTAACTTTGTTAAACAAGAAAGGTTTCTTGGCCACGCCAATGGCAATAGGAGATGATGCCTTCAATGACTTCTCTTCTGATGACTTTGCGAAGAAGGGTTCTGGCAATAGTGACAGGATAGAGGATATACAGTTAACTGAGGAAGAGTTGGACATGTTCATAGATCTCCATCCATTTAGTAATGCTTCACCCTATACCATCGTGGAGACAATGTCTCTTGGAAAGGCCCTTACCCTTTTTCGAGAAGTCGGTTTAAGGCATCTTCTGGTGATTCCCAGGGTCTCCAGTATTACCAGTCGTCGGCATACTGACGAGGCACGATTTTATGCCGGAACACATTCTGGGTTTGCATCCTTTGCTGGAAAGAAGCAAATGGAGGAGACTAAGAATAAAGTTGACATTTTTGAACAAATTCTTCTAAGGCTCAACACATGTAAATAA 2076 0.4263 MSVPLRALTTSLIFENELFKQDWRSRGKIQIFQYLLMKWVLCLLIGAIVSVVGFYNNLAVENLAGLKFVITSDMMLQRRFLLAFVVFFSSNLVLTLFSTIITAFIAPAAMGSGIPEVKAYLNGVDAPAIFTLRTLFVKIIGSISAVSSSLLIGKAGPMVHVGACVGSLLGQGGSKRYGLTWKWLHFFKNDRDRRDLITCGSAAGIAAAFRAPVGGVLFSLEEMASWWRSALLWRTFFTTAVVALVLRALIDVCLSGKCGLFGKGGLIMFDVYSESISYHLEDVPPAIILGVIGGILGSLYNALLSKVLRIYNMIHEKGIAYKILLACLISVITSGLLYGLPWFVSCRPCPVDATEECPTMDRSGNYKKFQCPPGHYNDLASLFFNTCGDAIKNLFSKNTDEEFSYSSMFIFFITCFFLSIFSYGVVAPAGLFVPNILIGASYGRVVGMWIGKNSTLNHGLFAVLGAASFLGGSMRMTVSLCVILLELTNNLLLLPLMMLVFNGIEKVRNIVFVLRTSSHNGFPVVDEPPYSEAPVLYGIILRQHLLTLLNKKGFLATPMAIGDDAFNDFSSDDFAKKGSGNSDRIEDIQLTEEELDMFIDLHPFSNASPYTIVETMSLGKALTLFREVGLRHLLVIPRVSSITSRRHTDEARFYAGTHSGFASFAGKKQMEETKNKVDIFEQILLRLNTCK 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1103 691 SUPERFAMILY Clc chloride channel 16 500 IPR014743 -
Lele24g1103 691 CDD CBS_pair_voltage-gated_CLC_euk_bac 500 638 - -
Lele24g1103 691 PRINTS Plant CLC chloride channel signature 255 262 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele24g1103 691 PRINTS Plant CLC chloride channel signature 12 20 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele24g1103 691 PRINTS Plant CLC chloride channel signature 237 247 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele24g1103 691 PRINTS Plant CLC chloride channel signature 223 231 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele24g1103 691 PRINTS Plant CLC chloride channel signature 379 395 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele24g1103 691 FunFam Chloride channel ClC3 30 353 - -
Lele24g1103 691 PRINTS Chloride channel signature 477 496 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele24g1103 691 PRINTS Chloride channel signature 459 475 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele24g1103 691 PRINTS Chloride channel signature 138 157 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele24g1103 691 PRINTS Chloride channel signature 202 221 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele24g1103 691 PRINTS Chloride channel signature 427 447 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele24g1103 691 PRINTS Chloride channel signature 107 124 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele24g1103 691 Pfam Voltage gated chloride channel 95 500 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele24g1103 691 Gene3D Clc chloride channel 30 507 - -
Lele24g1103 691 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 13 500 - -
Lele24g1103 691 SUPERFAMILY CBS-domain pair 505 637 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1103 Lele-ChrLele24 8616921 8620995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1103 13 641 Ion Channels AT5G33280 69.706 0.0 932