Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1097 ATGACGGAGAACAGCGACGGTGAGATTAGCTCTCCATCTTTCTCGTCCGAACAAACAGCAAGCACTTCCACCGTGGCGGAGGTTTGCAGTAGAGCAGATGTATTGGCCCGTGGAGTTCACGTGCCATCGAGTGGGAGATGCTACCGGGGAGTAAGGCGGAGGCCGTGGGGGAAATACGCTGCGGAGATTAGAGATCCCAAGAAGAACGGCGCGAGAGTGTGGCTTGGGACTTATGAGACGTCTGTGGAAGCTGCTTTGGCTTATGATCAAGCCGCTTTCAAGATGCTCTGCTCCAAAGCCAAGCTGAATTTTCCTCATCGCATTGGCTCAAATATGACGGAGCCACCAAGAGTGACCGGAAAGCGGCTGTTGCGAGAGCCTTTTGAGGAGGAGCCATTGACGGAGATGCCAATGACAGCAATGACGACATTCTCCATCGACGGCGGTGACAAATCAAGTAGAGAGGAGGATGGCATTCGTTTTACTCACCTTTGCTGGTCCTACTCTCTTGTCGTCACAGAGAGGTGGGAGAAGGACGGCGATGCCGTCTTCGTTGGAGGCGACAAGATCGATGGCGTGGTAGAGAGTAGAGGAGATGGCGAAATCGAAGGTGGGTGCTCAACTCATAAATCAGATTTGAAATAG 645 0.5271 MTENSDGEISSPSFSSEQTASTSTVAEVCSRADVLARGVHVPSSGRCYRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETSVEAALAYDQAAFKMLCSKAKLNFPHRIGSNMTEPPRVTGKRLLREPFEEEPLTEMPMTAMTTFSIDGGDKSSREEDGIRFTHLCWSYSLVVTERWEKDGDAVFVGGDKIDGVVESRGDGEIEGGCSTHKSDLK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1097 214 Gene3D AP2/ERF domain 47 107 IPR036955 GO:0003700|GO:0006355
Lele24g1097 214 ProSiteProfiles AP2/ERF domain profile. 47 105 IPR001471 GO:0003700|GO:0006355
Lele24g1097 214 CDD AP2 48 106 IPR001471 GO:0003700|GO:0006355
Lele24g1097 214 FunFam Ethylene-responsive transcription factor 2 46 106 - -
Lele24g1097 214 MobiDBLite consensus disorder prediction 194 214 - -
Lele24g1097 214 SMART rav1_2 47 111 IPR001471 GO:0003700|GO:0006355
Lele24g1097 214 PANTHER DNA-BINDING DOMAIN 24 126 IPR044808 GO:0003700|GO:0009873
Lele24g1097 214 Pfam AP2 domain 47 95 IPR001471 GO:0003700|GO:0006355
Lele24g1097 214 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Lele24g1097 214 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Lele24g1097 214 MobiDBLite consensus disorder prediction 1 20 - -
Lele24g1097 214 SUPERFAMILY DNA-binding domain 47 107 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1097 Lele-ChrLele24 8517817 8518856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1097 36 134 AP2-EREBP Transcription Factor Family AT2G44840 65.000 1.12e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele24g1097 AP2 1e-14 CL0081