Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1085 ATGGGGAAGAAAAAGGAACAAGTGGGAGATAAATCAAGTGATGATGGCGGGAATCAAAGCAAAGCTGGAGATAGTAGCCCCAAATCATATGATAAGGATACCATGGTGTTCATATCCATGGCCCAGGAGTTAAAGGATGAGGGAAACAAGCTATTCCAAAAGAGGGACAATGAAGGAGCCTTGATAAAATATGAGAAAGCTCTCAAATTGCTTCCGAAAAATCATATAGATGTGTCATATCTACGGAGTAACATGGCAGCATGCTACATGCAAATGGGACTTGGTGAGTACTCCAGGGCAATTCATGAATGCAATTTAGCCCTTGAGGTTACGCCGAAATACAGTAAGGCACTGTTGAAGAGGGCAAGGTGCTATGAAGGTTTAAATAGACTGGATTTAGCTCTGAGAGATGTTAGTACCATTTTGAAGATGGAATCAAATAATATCATGGCATTGGAGATTTCTGAAAGGGTGAAAAAATCACTTGAGGAGAAGGGATTAAGAGTGAATGATACAGTGATTGAGTTACCTCCTGATTATGTTGAACCCTCTTATACTTTTCCTCCAGAGAAAGCAGCGAAAGAGAAGACACGCAAGAAGAGCCCCAAAGTTGAGGTGAAGACCATTGATAATAAAGCTGTAGAAAAACAAGATGAGGAGAAATTGGAAGAGAAGAAGATTGGGGACAATATTGAGAAGTCTGGGAAGAAATATAAAAGGAAGGCCAAGGAAAAAGTTGATGAGAAGAAGGCCGATGTTAAGGAGGTTGTGGAGGAAACAATTAATGGTAGAAGAGATGATATACCTAAGAAAACAGCAAAACTTGTTTTTGGTGAGGACATAAGATGGGCTAAATTGCCTATTAATTGCAGCATGTTGCAGTTAAGAGAAGTTATCTGTGACCGCTTCCCAAGCCTAGGAGCAGTTCTTGTCAAGTACAGAGACCAAGAAGGTGATTTGGTCACAATCACTTCTGATTCTGAATTAAGATGGGCTGAAACTTCAGCAGGATCACCAGGTTCAATCCGGCTGTACATTGTTAAAGCTACCCCTGAGCAGGATCCATTCTTCGAGAAACTCAATAAAATGGAGGTTCAAAAGTCTCCTGTCAAAACAACTGAGAATGGATGTGTGTTGAAAGAAGCGGAAGTGATAAACTCATCTTGTGTTGAGGATTGGACAATCCGGTTTGCCCAGCTATTCAAAAACCATGTTGGATTTGAATCTGATAGATATTTGAATTTTCATGAGCTTGGGATGAAGCTTTATTCTGAGGCTATGGAGGAGACAGTTACAAGTGAAGAAGCACAAGGCTTATTTGACATGGCAGGAGATAAGTTCCAAGAGATGACAGCTCTAGCATTGTTCAACTGGGGAAATGTTCACATGTCTAGGGCAAGGAAGAAAGTGTATTTTACTGAAGATTCTTCTAAGAAGCATCTGGATGAACAAATCAAAAGTGCATATGGCTGGGCACAGAAAGAATATAAAAAAGCAGGAGAAAAATATGAAGCAGCCATTCAAATAAAATCAGATTTTTTTGAAGGCTTTCTGGCGCTGGGGCAACAACAATTTGAGCAAGCGAAACTTTCTTGGTATTATAATGCAATCAGCAGTGGTGCTGATTCATTGGCATGGCCTTTTTCTCATGTTCTTCAGCTTTACAACAATGCTGAAGATAACATGGAAAAAGGAATGCAGTTATGGGAACAGTCAGAGGAGCATCGCTTGATTGAAGCCTCCAAATCCAAGGATGTCAAATTACTTTTACATGACATGGGGTTGGATGGAATGTTTAAAAATATATCAGCAGATGAAATTGCTGCACAGGCTGCAAATATGAAATCTCAAATAAATCTTCTGTGGGGCACCATGCTATATGAGCGTTCAATTGTGGAATTCAAAGTTGGGTTACCAGTGTGGCATGAATCTCTGGAAGTAGCCGTTGAGAAGTTTAAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTGATGTTGAAGAACCACTGTTCAAATAATACTGCTGCAGATGGTCTAGAATTCAAAATTGATGAAATAGTACAAGCATGGAATGAGATGTATGAAGCTAAAAAGTGTCAGCGGGGAGTTCCTTCATTTCGCTTGGAAACCTTATTTAGGAGGCGAGTTTCAAAAATTTATCATGCCTTGGAGCTTGTGTGA 2181 0.4007 MGKKKEQVGDKSSDDGGNQSKAGDSSPKSYDKDTMVFISMAQELKDEGNKLFQKRDNEGALIKYEKALKLLPKNHIDVSYLRSNMAACYMQMGLGEYSRAIHECNLALEVTPKYSKALLKRARCYEGLNRLDLALRDVSTILKMESNNIMALEISERVKKSLEEKGLRVNDTVIELPPDYVEPSYTFPPEKAAKEKTRKKSPKVEVKTIDNKAVEKQDEEKLEEKKIGDNIEKSGKKYKRKAKEKVDEKKADVKEVVEETINGRRDDIPKKTAKLVFGEDIRWAKLPINCSMLQLREVICDRFPSLGAVLVKYRDQEGDLVTITSDSELRWAETSAGSPGSIRLYIVKATPEQDPFFEKLNKMEVQKSPVKTTENGCVLKEAEVINSSCVEDWTIRFAQLFKNHVGFESDRYLNFHELGMKLYSEAMEETVTSEEAQGLFDMAGDKFQEMTALALFNWGNVHMSRARKKVYFTEDSSKKHLDEQIKSAYGWAQKEYKKAGEKYEAAIQIKSDFFEGFLALGQQQFEQAKLSWYYNAISSGADSLAWPFSHVLQLYNNAEDNMEKGMQLWEQSEEHRLIEASKSKDVKLLLHDMGLDGMFKNISADEIAAQAANMKSQINLLWGTMLYERSIVEFKVGLPVWHESLEVAVEKFKLAGASPTDIAVMLKNHCSNNTAADGLEFKIDEIVQAWNEMYEAKKCQRGVPSFRLETLFRRRVSKIYHALELV 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1085 726 SUPERFAMILY CAD & PB1 domains 271 359 - -
Lele24g1085 726 Pfam PB1 domain 272 348 IPR000270 GO:0005515
Lele24g1085 726 Coils Coil 239 259 - -
Lele24g1085 726 Gene3D Tetratricopeptide repeat domain 38 170 IPR011990 GO:0005515
Lele24g1085 726 SMART tpr_5 79 114 IPR019734 GO:0005515
Lele24g1085 726 SMART tpr_5 41 74 IPR019734 GO:0005515
Lele24g1085 726 SMART tpr_5 115 148 IPR019734 GO:0005515
Lele24g1085 726 SMART PB1_new 270 349 IPR000270 GO:0005515
Lele24g1085 726 ProSiteProfiles PB1 domain profile. 270 349 IPR000270 GO:0005515
Lele24g1085 726 Gene3D - 266 348 - -
Lele24g1085 726 SUPERFAMILY TPR-like 41 528 IPR011990 GO:0005515
Lele24g1085 726 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
Lele24g1085 726 PANTHER PROTEIN CLMP1 3 724 IPR044517 -
Lele24g1085 726 MobiDBLite consensus disorder prediction 1 31 - -
Lele24g1085 726 CDD PB1 278 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1085 Lele-ChrLele24 8274648 8276901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1085 24 164 Calmodulin-binding Proteins AT3G25230 30.968 1.32e-07 53.1