Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1083 ATGGATGGGCACACAGGGAAGGTGGCGGAGAAGGGGAAGGAGGAGGTCCGATACCGGGGGGTGAGGAGGCGGCCGTGGGGGAAGTATGCGGCGGAAATAAGGGATCCGTCAAGGCAAGGAGCGAGGCAGTGGCTTGGGACATTTGATACGGCGGAAGATGCAGCAAGAGCTTATGACAAAGCGGCCTTTAACATGAAAGGCCATCTCGCAACCCTTAATTTCCCCACCGAATACTATTCTCATGTACGAGGTTCCCCACCATATCCTCCCTATTTAGCATCTTCTTCGCCGTCGTCGCCTTCTTTTCTTGGCCATGCAAGTGGAAGCTCGTCGACGTCTGTTTCACTACGGAAGCAGGTTTTTGAAATTGAGTGTTTGGATAATCAGGTGCTTGAAGACCTTCTTGAACCAGAAGATGAGAAGAAGAAAACTGGTGGAGATTGA 444 0.5158 MDGHTGKVAEKGKEEVRYRGVRRRPWGKYAAEIRDPSRQGARQWLGTFDTAEDAARAYDKAAFNMKGHLATLNFPTEYYSHVRGSPPYPPYLASSSPSSPSFLGHASGSSSTSVSLRKQVFEIECLDNQVLEDLLEPEDEKKKTGGD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1083 147 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Lele24g1083 147 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Lele24g1083 147 Gene3D AP2/ERF domain 16 77 IPR036955 GO:0003700|GO:0006355
Lele24g1083 147 PRINTS Ethylene responsive element binding protein signature 41 57 IPR001471 GO:0003700|GO:0006355
Lele24g1083 147 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Lele24g1083 147 ProSiteProfiles AP2/ERF domain profile. 17 75 IPR001471 GO:0003700|GO:0006355
Lele24g1083 147 SMART rav1_2 17 81 IPR001471 GO:0003700|GO:0006355
Lele24g1083 147 MobiDBLite consensus disorder prediction 95 110 - -
Lele24g1083 147 FunFam Ethylene-responsive transcription factor 2 16 77 - -
Lele24g1083 147 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Lele24g1083 147 MobiDBLite consensus disorder prediction 85 110 - -
Lele24g1083 147 PANTHER DNA-BINDING DOMAIN 11 136 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1083 Lele-ChrLele24 8254943 8255386 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1083 14 142 AP2-EREBP Transcription Factor Family AT3G23230 58.915 5.83e-45 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele24g1083 AP2 8.9e-15 CL0081