Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1082 ATGGATAAAGCCAACAAGGACGTGGAGGGCGCTGGCGGCATCCGGTACCGGGGAGTGAGGAGGCGGCCGTGGGGGAAGTTTGCAGCGGAGATCCGGGACTCAACGAACCAAGGACAGAGGTTGTGGCTGGGGACTTTCGACACGGCAGAGGAAGCCGCCAGGGCGTACGACAGAGCTGCTTACAACATGAGAGGCTCATTCGCAATCCTCAACTTTCCAAATGAATACCCTCTCACAGCTAATCGTTATAATAACACTGCAACTTCGTCATCTTCTTCTTCATCAGCTTCTTCTTCTTCCTCCACGAGGAGCCGCCATCATGAAATATTCGAGTTTGAGTACTTGGATGATACACTTCTGGAGGAGCTTCTGGACTGTGAGGACAAAACGAAGAAGGGAAAGTGA 405 0.521 MDKANKDVEGAGGIRYRGVRRRPWGKFAAEIRDSTNQGQRLWLGTFDTAEEAARAYDRAAYNMRGSFAILNFPNEYPLTANRYNNTATSSSSSSSASSSSSTRSRHHEIFEFEYLDDTLLEELLDCEDKTKKGK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1082 134 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Lele24g1082 134 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Lele24g1082 134 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Lele24g1082 134 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Lele24g1082 134 PANTHER DNA-BINDING DOMAIN 15 128 IPR044808 GO:0003700|GO:0009873
Lele24g1082 134 MobiDBLite consensus disorder prediction 83 105 - -
Lele24g1082 134 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Lele24g1082 134 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Lele24g1082 134 MobiDBLite consensus disorder prediction 83 103 - -
Lele24g1082 134 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Lele24g1082 134 CDD AP2 15 74 IPR001471 GO:0003700|GO:0006355
Lele24g1082 134 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1082 Lele-ChrLele24 8242904 8243308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1082 15 131 AP2-EREBP Transcription Factor Family AT3G23230 62.810 4.60e-45 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele24g1082 AP2 7.8e-17 CL0081