Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1072 ATGGCGGAGCAAACTGAAAAGGCCTTTCTGAAGCAGCCAAAAGTGTTTCTAAGCTCGAAGAAATCAGGGAAGGGAAAGAGGCCCGGAAAAGGAGGAAATCGCTTTTGGAAGTCTATTGGACTTGGATTCAAGACTCCCAGGGAAGCTATCGAAGTTTCAACACTCTTGTTGTTTTGGACTAGAACCTACATTGATAAGAAGTGTCCCTTTACTGGCACTGTTTCTATCAGGGGTCGTATCCTAGCTGGCACTTGTCATAGTGCTAAGATGAATAGGACTATTATTGTTAGAAGGAACTATCTTCATTTTGTCAAGAAGTACCAGAGATATGAGAAGAGGCACTCAAACATTGCTGCTCACTTATCACCTTGCTTTCGTGTAAAGGAAGGAGATCATGTTATTATTGGCCAATGCAGGCCACTCTCAAAGACAGTGAGGTTCAACGTGTTAAAAGTGATCCCTGCTGGATCTGCTAGTGGTGCGAAGAAGGCATTTACTGGAGTGTGA 507 0.4359 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKSIGLGFKTPREAIEVSTLLLFWTRTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIAAHLSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSASGAKKAFTGV 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1072 168 Pfam Ribosomal_S17 N-terminal 4 81 IPR032440 -
Lele24g1072 168 TIGRFAM uS17_arch: ribosomal protein uS17 64 152 IPR028333 -
Lele24g1072 168 SUPERFAMILY Nucleic acid-binding proteins 77 156 IPR012340 -
Lele24g1072 168 ProSitePatterns Ribosomal protein S17 signature. 130 142 IPR019979 GO:0003735|GO:0005840|GO:0006412
Lele24g1072 168 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 10 159 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele24g1072 168 FunFam 40S ribosomal protein S11 1 167 - -
Lele24g1072 168 Gene3D - 1 167 - -
Lele24g1072 168 Pfam Ribosomal protein S17 83 151 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele24g1072 168 PRINTS Ribosomal protein S17 family signature 140 147 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele24g1072 168 PRINTS Ribosomal protein S17 family signature 97 120 IPR000266 GO:0003735|GO:0005840|GO:0006412
Lele24g1072 168 PRINTS Ribosomal protein S17 family signature 130 140 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1072 Lele-ChrLele24 8126028 8127608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1072 1 168 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 86.310 2.42e-94 268