Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1071 ATGCGTGTGCAGGACGCGGAGCAAATTGTTGAAGAAGATACGGAGACCCATGAAAGCAGAAGGAGGACATGGCCCTTGCATTGTGATTTCTCGCGTGCCCAGATGGAGAACTGGGAAAAGGAGCCTCCTTTAACAACTTCCAGTGTTGGAAATTCATACCCTCTGGAAAGCATAGGTGAAGATGCAGTGATTGGGGACAAAAGACAGACATTGATGAACTTCGTCCCTGTTATTCGGTCCGGCGAGTGGTCAGATATTGGAGAGCGTCCTTATATGGAGGACACTCATATATGTGTTGGAGACATGGCGAAGGAATTAGGGTATAAAGTTATCAGTGAGGACGCAGTTTCCTTTTATGGAGTATTTGATGGACATGGCGGTGAGAGTGCTGCGAAATTTGTACGTGATTATCTGCCAAGAGTGATTGTAGAAGATGCTGACTTTCCCTTGGAGATGGAGAAGGTAGTGACAAAGTCATTCTTGGAGACTGATGCTGCATTTGCGAAGTCTTGTTCTCTTGAGTCGTCCATGTCTTCTGGTACAACCGCACTAACCGCCATTATACACTGCCGGTCTTTGCTTGTAGCCAACGCTGGAGACTGCAGGGCGGTGTTGTCCCGATGTGGAGGAGGATGGAGAAATGATTCTTATCATCATTATCATCATGTTGAGGCTATTTTTCTCATTGTTATTGGGAAAGCGGGATGGAATAATTTGAGAACTCCTTTTAATGATACACCAGTTTCTTGTTTAACTGATGGGGTGATGGAGTCAAGTCCTGTGAAGATTGAAGATCATCCAACTGAACTTCTAGTAATCTCTGCTACAGATTTAGATGATCAAGTTCAGAAAGTTACAGAGGAATCATCTTTATCACATTCAACAGAAGCTAGAATTAGCAGCTCACGTGCTGAAACTGGAACCTCCTTTGGTAGCATTATTCAATCCTGTGAGAATGCTAATCTTCAATATTCTTCCAGAAGTGTTGCAACTAGCAATCTGAGGGAGTGCTTGTTTAAAAGAAAGGAGTTAGTTCCTCCTCATGAGGTAAGTACTGATCATAGTCATAATGAATCTTATAGGGACAGCAGCAACACATCTAGTACTTCCTCTGTAGAACAGCAGTCTTCAGATCCAGTCTCTGTAAATAGTTCTGCTAACAACGATGCAGTTAACGATATTGATAATTCAGTGGATTGCAGTATCCCCTCAATATCTCATGGGACATTGCGTCTAAGGAGTTCACCCCCTCAAGTGTATGAAGACTCCAGTTCCCAGGGAAGTCATGTTGAGAGTCACAGCAGTGCAGCTACAGCTTTTGAGAATTATGATTCAAATCCCGGCTCTCAAGTTTCAGATCTTCCAGTAATTTCTCTGTTGCAAGAAAATGATTCTCATGAAGAAACAATTCCTCCAAGTTTAGGGTTTCTTGCTCCCAACAGGGGAGGAGGACATGGGAATGAGAGTGTGTTTCATGTTGATGTGGTTACTATATCATATTATACTTTGTCTCATAGCAATTCTGATGCCATTGATCATAGTACCAGAAGAAATGGTAGGAGACAATTTTGGGATGCTTTTTCTCATCGTAGTTCTAGAAGGTTTCGTATTTCCCCAACCATTGTCTTCTCAGCTGGTGATCCTGATGACCTAGCATCTCAAGACAGATGGCTTCTTGATTTGAGCAGTGGTTTCTCAAATGATGAGGTTGGAGAGGATTTTGAATATCTTGGCAGTAGAATCCGCAGATCTAATGCACGAATGCTGCACTCAAGATCTCAGATCTGGGAAAGACTCCGTGATCCCCTTAATGAAACTGATCCATGGACTAATTCTTGTCCATTAGGACTCCACCCTGATGGCAGGTGTTTCTATGAGCCTTTCTCCATTACTGAGGAATCTAATACCCGAGCAAGCACGTCAAGAATAGTCATGCTTGCAGAAGCTTTATTTGAGGTTCTCCCCTTCTCTCAATTCTCAACTACGTTAACTTCAAGTTAA 2001 0.4288 MRVQDAEQIVEEDTETHESRRRTWPLHCDFSRAQMENWEKEPPLTTSSVGNSYPLESIGEDAVIGDKRQTLMNFVPVIRSGEWSDIGERPYMEDTHICVGDMAKELGYKVISEDAVSFYGVFDGHGGESAAKFVRDYLPRVIVEDADFPLEMEKVVTKSFLETDAAFAKSCSLESSMSSGTTALTAIIHCRSLLVANAGDCRAVLSRCGGGWRNDSYHHYHHVEAIFLIVIGKAGWNNLRTPFNDTPVSCLTDGVMESSPVKIEDHPTELLVISATDLDDQVQKVTEESSLSHSTEARISSSRAETGTSFGSIIQSCENANLQYSSRSVATSNLRECLFKRKELVPPHEVSTDHSHNESYRDSSNTSSTSSVEQQSSDPVSVNSSANNDAVNDIDNSVDCSIPSISHGTLRLRSSPPQVYEDSSSQGSHVESHSSAATAFENYDSNPGSQVSDLPVISLLQENDSHEETIPPSLGFLAPNRGGGHGNESVFHVDVVTISYYTLSHSNSDAIDHSTRRNGRRQFWDAFSHRSSRRFRISPTIVFSAGDPDDLASQDRWLLDLSSGFSNDEVGEDFEYLGSRIRRSNARMLHSRSQIWERLRDPLNETDPWTNSCPLGLHPDGRCFYEPFSITEESNTRASTSRIVMLAEALFEVLPFSQFSTTLTSS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1071 666 ProSiteProfiles PPM-type phosphatase domain profile. 79 327 IPR001932 -
Lele24g1071 666 MobiDBLite consensus disorder prediction 346 360 - -
Lele24g1071 666 Pfam Protein phosphatase 2C 91 212 IPR001932 -
Lele24g1071 666 SMART PP2C_4 69 286 IPR001932 -
Lele24g1071 666 MobiDBLite consensus disorder prediction 361 448 - -
Lele24g1071 666 CDD PP2Cc 78 209 IPR001932 -
Lele24g1071 666 SUPERFAMILY PP2C-like 72 227 IPR036457 -
Lele24g1071 666 MobiDBLite consensus disorder prediction 346 448 - -
Lele24g1071 666 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Lele24g1071 666 MobiDBLite consensus disorder prediction 1 22 - -
Lele24g1071 666 Gene3D - 65 225 IPR036457 -
Lele24g1071 666 PANTHER RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED 249 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1071 Lele-ChrLele24 8106199 8118768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1071 74 209 PP2C-type Phosphatase Gene Family AT2G25620 56.618 1.43e-44 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lele24g1071 PP2C 1.1e-20 CL0238