Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1068 ATGGCGTTTGACCAAAATTCCGTTCCAAAGGATCTGCGACCGTTAAACGTAGCTCGAACTATGCCTGACGATCCTCTCATTGTACCGGCGACTACCATGGGCCGAACGTTAGAATGTTTTCCTCCAACTTCAGCTCGTGAGATCGGTTGCCCAGGGACTATGTCCATTTTTTACCCAGCACAGGTATCTGATGCTGGGCTTGTTGGTGTGGGGTATGGAACTATGCCAACGGGTCCTACTTCCTGGTGCGTTCGTCCAAGTGTGTCAATTGTGCATCCGGCTATGAGTCCTAATGTTGGGTATAACTGTAGTTCTAATTTTGGCAATCGGATTGCTGGTGGCAATGCTGTTGATCTTTCAAGCGGTGTCGTTGCAAATGGACCTGGTTATACCACGATTCTGAGCAACTGGTCTGGGAGCAGTGGATTGGATAGGGCTGGAAACGATGCAGTTAACGGGTATGGTTGTAGTTCAGTTCAGGGAAATAGAATCATTGGCAATGCCATTGCTAGTGATCAGGTAGGCAGTATTGCAGCAACTGGGTTTGATAATAGCCCCACTCAGCGTAATGGAGCCGATCTTGCGAGTGATGAGGGCGGGGATGACTCCGTGTCTGGGAGAAAAGTGAAGTTTTTATGCAGCTACGGTGGAAAGATTATACCTAGACCTAGTGATGGGATGTTGAGATATGTTGGAGGGCAGACAAGAATAATTAGTGTTAAGAGAGATGTGAGCTTCAACGAACTGATGAAAAAGATGGTTGATACATATGGTCAACCTGTGGTTATCAAGTATCAGCTCCCTGAAGAGGATCTTGATGCATTGGTGTCAGTTTCTTGCCCAGATGATCTTGAAAATATGATGGACGAGTACAAAAAATTAATTGAAAGATCTTCAGATGGTTCAGCTAAACTAAGGATTTTTCTGTTTTCTGCATCAGAAATTGATGCTCCTGGTGGGGGGCCATTAGTAGATCTACATGATAGTGGGCAGAGATATGTTGAGGCTGTGAATGGAATTACAGATGAAGTCAGTTGTCGGCTCACGAGGAAAGGGAGTATCGCAAGTGCAGCTTCAACCCAAAATTCAGATGTTAGTGGGGCTGAGGCTCTTGATAGTTCTGTTGCTGGTTCAGGGGATGCAAGTGTAACACCATCATTTTGCGTGATATCACCCAGAGACAATGTGGCAGCTTCTCATGACACTGCTGCAAAGTTGGTGGTGGCAGATCAAAGTCCAAGAGTATACTCAGATGCTTCTGCAGTTCCGGTGGGCATGCCAGTTGCTATGTCTGGTCCGTCCCAGACTTCAGCTTTCCAGAATGAGGCTGAACTAGAAAAGTCTGTGCCTTTTACTTTACAGCAACAGCAATTTGGAGTGCAGCAATCTGGAATGGACATTTCACCTCCTGCACCTTATGTGCGCCCTTTTGTTGATTCACGTCAAGAAGTTATGAATCATGCAGATTATGTCCAGCTGCCTCCTCAGGGAGGGTTCCCAAATTCTCAACTTTTAGGGAAGCATGGGCCTGCCTTCACTCAACAGCAATTCCATCATAATATTCCATCTTTTGTTCCCCACCAGTACATCCCTGCAGTGCCGATGACAATGACTCCATCAGCTTCTCATGCTAGTGTAAGACCAAACGTTCCCCAACAATTGATGCAGCCCCAACTAACCCGTTTGGACCAATATAATGATGAAAGCACATCAGGGCCAAAGATCATCCAGCTTCCTGTTGAACAAAACTACAATGCTTACCCAGTTCAAGTTCCTTCTGTTGTGGTTGCTGGTAATTATGGTTGGGTTCAGGTTCCTCCACAAGAGAATGTTTTGCTGTCTGATGGGTTGTTACCTCAACAACAAGTAAGAATCCCTGAGAAATTCCAGAAAGAGGAAGACTGTTATATGTGTCAGAAATTATTGCCTCATGCATATTCAGATCCTGTGGTTCCGGATCAGAGGGATGGTGTTGCAAGTTCAATTTCTGATTCAATCCTAAGCTATCACAGTCTCCCTATGGAGGAAAACTTACAAGCTCAAGCAACAAACAGGGTGATGGTGACTGCACCCTTGATGGATGGTGCTATTGAACAAGGGATTGACACCCAATCCAGAGTCGTTAGCAAAGTGGAATCTCCCATTGGAATACCTTGCACTAATACAACTGGCCTTTCTTATAAGCTTGAGTCACAGCCTGAGGGGGAGAGGAATGTTATACAAAAGCCTGATGCTTTTGATCATCTGAGAAGTCCCATTATCCCCGATGTGATTGTAAAGGCAGGAGAAAGCCAGTCACCAACTGATGGGTTCATGGGGACAGCGCCACTGTCTTGCCTAGATGATGTTGTTGGCCAACAAACGGTGCCACTTGAAAACTGGGTTAAGCAGGATGTGCTAATGAATACACCTGTTTATAGTTATACAACTCCTGTTCAAGAGTCCCCTAATGAGCATACAAATGAATTTGTTAACTTGGTCTCCCAGCCGGTGGAATTTAGTCGAATAGCTCAAACACCTGTTTGGGACATTCCTGGATCAAATCCTCAGTCAAAAAGTGGAAACCTCCTCAAGGATGATAATCTTCCATCTTTAGTATCTCCGTCTGTCAGGTCTGGAGATGTGCTGAATTCTTCAAACTCACTTTTCAGTAATCAGGATCCCTGGAATGTACACCATAGTACGTACTTTCCTCCTCCAAGACCTACAAAAGTTCCTTCAAAGAAAGAAATATATTCTTCTAAGGATCACTTTGGTGAGGAATTGACTAGCGACTCTGGAGAACAAAATTTAGAAGCTCAATTGGAGGATAGTCTTTACCAGTCATTCAAACAGAGTTTATATTTAGAGCATGGCTATTCAGCCAGGGGCTCAGCTGAAGACCAGATCAAACAAGAACTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTGCACCCAAGCACTCCTAGTCCTGATTTACATGGTAGAGATGTGTCCATTCAGGAAGACGTTGGAGATGTAGATGATCTAAACAGATCTAAAGCTTTGGATGTCAAGAGCAAGTTTCCAGAAAAGCCAAATTTTGGCATTCCTTTATCAGATGGTCTTGGAGGATTGCAGATTATAAAGAATTGTGACCTTGAAGAGCTGAGAGAACTAGGTTCAGGTACCTTTGGGACTGTATATCATGGAAAATGGAGGGGCAGTGATGTGGCAATCAAACGCATTAATGATAGGTGCTTTTCTGGAAAGCCTTCTGAGCAAGAGCGCATGAGGACTGACTTCTGGAATGAAGCAATCAAACTTGCTGACTTGCACCATCCAAATGTTGTAGCATTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACAGAGTTTATGGTCAATGGTTCTCTAAGAAATGCCTTGCAGAAAAGTGATAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCATTGGATGTCGCATTTGGTATGGAATACCTGCACGGGAAAAATATTGTGCACTTTGACTTGAAAAGTGACAACTTGCTAGTGAATCTCAGAGATGCACACCGCCCAATATGCAAGGTTGGTGATTTGGGTCTATCCAAGGTGAAATGTCAGACCCTGATCTCTGGTGGGGTGCGAGGAACACTGCCTTGGATGGCTCCAGAACTACTGAATGGAAGCAGTAGCCTTGTTTCTGAGAAGGTTGATGTGTTTTCATTTGGTATTGTGATGTGGGAAATCTTCACAGGAGAGGAGCCATATGCTGATTTGCACTATGGTGCTATTATAGGGGGTATTGTGAGCAACACTTTGCGACCTCCGGTTCTAGATTCCTGTGATCCAGAATGGAGATTGCTGATGGAGCGATGCTGGGCGTCAGAGCCATCGGAGAGGCCAAGCTTTACCGAGATCGCGAATGAACTACGCTCTATGGCGTCCAAGGTTCCTCCCAAAGGACAAGCTCAACAGCAGCAACCCTCTGCATTGCAGGCTTAA 3987 0.4507 MAFDQNSVPKDLRPLNVARTMPDDPLIVPATTMGRTLECFPPTSAREIGCPGTMSIFYPAQVSDAGLVGVGYGTMPTGPTSWCVRPSVSIVHPAMSPNVGYNCSSNFGNRIAGGNAVDLSSGVVANGPGYTTILSNWSGSSGLDRAGNDAVNGYGCSSVQGNRIIGNAIASDQVGSIAATGFDNSPTQRNGADLASDEGGDDSVSGRKVKFLCSYGGKIIPRPSDGMLRYVGGQTRIISVKRDVSFNELMKKMVDTYGQPVVIKYQLPEEDLDALVSVSCPDDLENMMDEYKKLIERSSDGSAKLRIFLFSASEIDAPGGGPLVDLHDSGQRYVEAVNGITDEVSCRLTRKGSIASAASTQNSDVSGAEALDSSVAGSGDASVTPSFCVISPRDNVAASHDTAAKLVVADQSPRVYSDASAVPVGMPVAMSGPSQTSAFQNEAELEKSVPFTLQQQQFGVQQSGMDISPPAPYVRPFVDSRQEVMNHADYVQLPPQGGFPNSQLLGKHGPAFTQQQFHHNIPSFVPHQYIPAVPMTMTPSASHASVRPNVPQQLMQPQLTRLDQYNDESTSGPKIIQLPVEQNYNAYPVQVPSVVVAGNYGWVQVPPQENVLLSDGLLPQQQVRIPEKFQKEEDCYMCQKLLPHAYSDPVVPDQRDGVASSISDSILSYHSLPMEENLQAQATNRVMVTAPLMDGAIEQGIDTQSRVVSKVESPIGIPCTNTTGLSYKLESQPEGERNVIQKPDAFDHLRSPIIPDVIVKAGESQSPTDGFMGTAPLSCLDDVVGQQTVPLENWVKQDVLMNTPVYSYTTPVQESPNEHTNEFVNLVSQPVEFSRIAQTPVWDIPGSNPQSKSGNLLKDDNLPSLVSPSVRSGDVLNSSNSLFSNQDPWNVHHSTYFPPPRPTKVPSKKEIYSSKDHFGEELTSDSGEQNLEAQLEDSLYQSFKQSLYLEHGYSARGSAEDQIKQELQAVAEGVAASVLHPSTPSPDLHGRDVSIQEDVGDVDDLNRSKALDVKSKFPEKPNFGIPLSDGLGGLQIIKNCDLEELRELGSGTFGTVYHGKWRGSDVAIKRINDRCFSGKPSEQERMRTDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEFMVNGSLRNALQKSDRNLDKRKRLLIALDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDAHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWEIFTGEEPYADLHYGAIIGGIVSNTLRPPVLDSCDPEWRLLMERCWASEPSERPSFTEIANELRSMASKVPPKGQAQQQQPSALQA 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1068 1328 MobiDBLite consensus disorder prediction 1313 1328 - -
Lele24g1068 1328 CDD PB1_UP2 212 310 - -
Lele24g1068 1328 ProSiteProfiles Protein kinase domain profile. 1042 1309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1068 1328 SMART serkin_6 1042 1308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1068 1328 Gene3D Phosphorylase Kinase; domain 1 1035 1129 - -
Lele24g1068 1328 Gene3D - 229 312 - -
Lele24g1068 1328 MobiDBLite consensus disorder prediction 842 864 - -
Lele24g1068 1328 PANTHER SERINE-THREONINE PROTEIN KINASE 261 1307 - -
Lele24g1068 1328 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1035 1129 - -
Lele24g1068 1328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1167 1179 IPR008271 GO:0004672|GO:0006468
Lele24g1068 1328 SMART PB1_new 223 312 IPR000270 GO:0005515
Lele24g1068 1328 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1130 1322 - -
Lele24g1068 1328 CDD STKc_MAP3K-like 1048 1305 - -
Lele24g1068 1328 ProSitePatterns Protein kinases ATP-binding region signature. 1048 1069 IPR017441 GO:0005524
Lele24g1068 1328 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 228 312 - -
Lele24g1068 1328 MobiDBLite consensus disorder prediction 180 203 - -
Lele24g1068 1328 Pfam PB1 domain 228 311 IPR000270 GO:0005515
Lele24g1068 1328 MobiDBLite consensus disorder prediction 1309 1328 - -
Lele24g1068 1328 PRINTS Tyrosine kinase catalytic domain signature 1161 1179 IPR001245 GO:0004672|GO:0006468
Lele24g1068 1328 PRINTS Tyrosine kinase catalytic domain signature 1232 1254 IPR001245 GO:0004672|GO:0006468
Lele24g1068 1328 PRINTS Tyrosine kinase catalytic domain signature 1276 1298 IPR001245 GO:0004672|GO:0006468
Lele24g1068 1328 PRINTS Tyrosine kinase catalytic domain signature 1124 1137 IPR001245 GO:0004672|GO:0006468
Lele24g1068 1328 SUPERFAMILY Protein kinase-like (PK-like) 1037 1304 IPR011009 -
Lele24g1068 1328 Pfam Protein tyrosine and serine/threonine kinase 1043 1305 IPR001245 GO:0004672|GO:0006468
Lele24g1068 1328 Gene3D Transferase(Phosphotransferase) domain 1 1130 1327 - -
Lele24g1068 1328 SUPERFAMILY CAD & PB1 domains 224 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1068 Lele-ChrLele24 8048510 8057108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1068 115 1325 MAP Kinase Kinase Kinase AT3G46920 45.020 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele24g1068 PK_Tyr_Ser-Thr 6.6e-59 CL0016