Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1047 ATGAAAACTCTACAAGGCAGCCCAAAAATGAAGTCAAGAACTGCATTAGTTGGTTTTCTTGTTTCTCTTTATCTTTCATTTCAATGTGCAGAAGAACAACTTGAGGTGAATGCTGGTTATTGGACACCGGGTCAGGGTAGTCCCATTTCAGAAATCGACTCCACACTGTTTACGCACCTCGTATTCGATAGAGCTTTTATCAACACTTCGTCCTTCGAGGTCTTAATCCCCCCATCGCATGAGCAGGACTTGTTTGCATTCTCCAGAACTGTCAAAGAAAAGAACCCATCCATCAAAACACTTCTAACTATTTGGGGGAAAACCCCTGATACATATACCTCAATGGCGAGAAATTCTTCTTCAAGAAGTTCCTTCATCCAATCTTCAGTGGACGTAGCCCGGGCACATGGGTTTGATGGCCTCGACCTTTACTGGGATGTGCCTCTAACAAAATCTGACATGGATGATATGGGAACTCTTATAAAAGAGTGGAGTATATATATAGATCGTACTGCTCCAGAACTGATCTTAACTGCCACTGTTCAATATTCACCCTATTCGCAACTTAATGGGTATGTTTATCCTATCGAGTCGATTGTCACATTCTTGGACTGGGTACATATTAAAACTTTTTCTTACATTGATTGGAAGCGAGATGTCACTATGGCACATTCAGCTTTGTATGACCCTTCAAGTAATTATAGCACAGACTATGGTATCAAACAATGGATTCTTAATGGGTTGATTCCTAGCAGGACGGTTTTGGGGTTGGCCTTTTTTGGGCATACATGGAATCTTACTGATCCTAAAAACAATGCAATAGGTGCGCCGTCGACAGGTTTCCCCGTGGGGTTGATGGGATACAAGCAAATCAAAGATCAAATTCCTTCATGCGGAAGCAACAAAATATACAATGATACTTATAAAATCTACTACTGCTCATCTGGATCAACTTGGATAGGATTCGACGATGTTGAGACAATCAAAATGAAGGTGTTTTATGCCAAGGAAACAGAGTTGCGTGGTTACATTGTGTCGGACGTTTCCTATGACGACAATTGGTTGCTGTCCCGTTCAGCTAAAGGGGAAGACAATAAAGCTAAGCAGGAAGATGACTGGTTACGTTTGCTGAAGATTCTCTTGGCTCCAGCTGTTGTATCTGTCTTGCTATTAAGTTTCTTAGCCTACATCCTACAGAGGAGAATGTTCAAAGCAAAAGGAGATGAAGAAGCTGCGGAACATTCGAATGGTAATGCAACAGATGTTAGAGTCTTTTCTTTCTGTGACGTTGAAAGGGCCACAAATAGATTCTCAATTGAAAATAAGATTGGAGAGGGTGGTTTTGGAGTTGTTTACAAGGGTATATTACCTGATGGTGAGGAAATAGCAGTGAAAAGACGATCAAAAGGTTCCAAGCAAGGATTTAAGGAATTCAAAAATGAGACAACACTCAATGCAAGACTGCAACACGTCAATCTTGTTCGAGTGTTGGGGTTCTGCAATGACAGGGAAGAACAAATGTTGGTTTATGAGTACATGCCAAACAAAAGTCTGGACTTTTATCTCTTCGACCCTACAAAGCAACATCTACTGGATTGGAATAACCGGATTTGTATCATTGAAGGAGTTACTCAAGGGCTTATCTACCTTCAAGAATATTCTAGATGGACAGTAATTCATAGAGACTTGAAAGCTAGCAATATTTTATTAGATCATGAGATGAAGCCAAAGATTTCAGATTTTGGCATGGCAAGACCATTCAAAAAAGATGAACATGAAGAAAGGGCCAGCAAACTTGTAGGGACATACGGCTACATCCCTCCTGAGTATGTTGAGAAAGGGTTGTGCTCCATAAAATCAGATGTTTATAGCTTTGGTATCATCCTCCTACAAATTATTAGTGGTAAAAGGATCTCAAGCTTATATGGAGAGAGCAATGATTTGAACCTCTTAGAATATGCTTATCTGCTGTGGAAAGAAGGAAAAGGCATGGAATTCATGGATTCTTTACTTGATGATATATCCTCTCCATGCAAATTGATGAAATGCTTGGAAATTGCTCTCCTCTGCGTCCAGAACGATGCAGAAGATAGACCAAGCATGCTAGAAGTAGGGTTAATGCTAAGAAACAAAAGCAACCTCCTAACTATCCCAAAACAGCCAGCATATTCAAAGAGAGGAAATGAAGAGGCATTGAGGTTCGTTCAACAGCCAGAAATTTGTTCACGAAATGAAACAACAATGTCTCCAGTTAGGGGTCGATAG 2265 0.4044 MKTLQGSPKMKSRTALVGFLVSLYLSFQCAEEQLEVNAGYWTPGQGSPISEIDSTLFTHLVFDRAFINTSSFEVLIPPSHEQDLFAFSRTVKEKNPSIKTLLTIWGKTPDTYTSMARNSSSRSSFIQSSVDVARAHGFDGLDLYWDVPLTKSDMDDMGTLIKEWSIYIDRTAPELILTATVQYSPYSQLNGYVYPIESIVTFLDWVHIKTFSYIDWKRDVTMAHSALYDPSSNYSTDYGIKQWILNGLIPSRTVLGLAFFGHTWNLTDPKNNAIGAPSTGFPVGLMGYKQIKDQIPSCGSNKIYNDTYKIYYCSSGSTWIGFDDVETIKMKVFYAKETELRGYIVSDVSYDDNWLLSRSAKGEDNKAKQEDDWLRLLKILLAPAVVSVLLLSFLAYILQRRMFKAKGDEEAAEHSNGNATDVRVFSFCDVERATNRFSIENKIGEGGFGVVYKGILPDGEEIAVKRRSKGSKQGFKEFKNETTLNARLQHVNLVRVLGFCNDREEQMLVYEYMPNKSLDFYLFDPTKQHLLDWNNRICIIEGVTQGLIYLQEYSRWTVIHRDLKASNILLDHEMKPKISDFGMARPFKKDEHEERASKLVGTYGYIPPEYVEKGLCSIKSDVYSFGIILLQIISGKRISSLYGESNDLNLLEYAYLLWKEGKGMEFMDSLLDDISSPCKLMKCLEIALLCVQNDAEDRPSMLEVGLMLRNKSNLLTIPKQPAYSKRGNEEALRFVQQPEICSRNETTMSPVRGR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1047 754 SUPERFAMILY Protein kinase-like (PK-like) 420 725 IPR011009 -
Lele24g1047 754 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 35 367 IPR001223 GO:0005975
Lele24g1047 754 Gene3D Transferase(Phosphotransferase) domain 1 513 721 - -
Lele24g1047 754 ProSitePatterns Protein kinases ATP-binding region signature. 443 465 IPR017441 GO:0005524
Lele24g1047 754 SUPERFAMILY (Trans)glycosidases 37 354 IPR017853 -
Lele24g1047 754 Gene3D - 259 322 IPR029070 -
Lele24g1047 754 ProSiteProfiles Protein kinase domain profile. 437 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1047 754 SMART 2g34 35 351 IPR011583 GO:0008061
Lele24g1047 754 SUPERFAMILY Chitinase insertion domain 260 322 IPR029070 -
Lele24g1047 754 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 357 749 - -
Lele24g1047 754 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 513 716 - -
Lele24g1047 754 FunFam Uncharacterized protein 412 512 - -
Lele24g1047 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Lele24g1047 754 Gene3D Glycosidases 50 353 - -
Lele24g1047 754 Pfam Glycosyl hydrolases family 18 38 351 IPR001223 GO:0005975
Lele24g1047 754 Gene3D Phosphorylase Kinase; domain 1 399 512 - -
Lele24g1047 754 SMART serkin_6 437 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1047 754 Pfam Protein kinase domain 438 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1047 Lele-ChrLele24 7833464 7837386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1047 376 726 Receptor kinase-like Gene Family AT4G05200 47.159 2.10e-105 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele24g1047 Glyco_hydro_18 3.9e-53 CL0058