Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1037 ATGTCAGGAGAAGAAGATGTACCAGTAGCTGTTGAGGCTTCAGCACCCTTGGGTGAGAGCATGGACATCATGACTGCCTTGCAACTTGTGTTGAGGAAGTCTCTGGCCCATGGGGGTCTTGCAAGAGGACTCCATGAAGGTGCCAAGGTGATCGAAAAGCATGCTGCACATCTCTGTGTGCTTGCTGAGGACTGTGATCAGCCTGATTATGTTAAACTGGTCAAGGCACTTTGTGCTGATCATAATGTGAAATTGATGACTGTCACCAGTGCTAAAACTCTCGGCGAATGGGCTGGTTTGTGCAAGATTGATTCTGAGGGAAAAGCAAGGAAAGTAGTTGGCTGCTCCTGTGTTGTTGTAAAGTTTAAACAAATTACATTCTTCATTCTTTATCATACTTGTATTATGGTTCTTGAGCTCTTAGTTGAAATAAAACCTTTGGATTCTGCAGGACTTCGGAGAGGAATCACCAGCATTAGATATTGTTCAGCAATACATAAAAGCTCAATAAGTTGGGGGGCAAAAACGAAATATGGAGAGCATGAAATGTCTTTTGCGTAG 561 0.4332 MSGEEDVPVAVEASAPLGESMDIMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCDQPDYVKLVKALCADHNVKLMTVTSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKFKQITFFILYHTCIMVLELLVEIKPLDSAGLRRGITSIRYCSAIHKSSISWGAKTKYGEHEMSFA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1037 186 PANTHER 40S RIBOSOMAL PROTEIN S12 14 121 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele24g1037 186 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 26 119 IPR004038 -
Lele24g1037 186 Gene3D - 6 126 IPR029064 -
Lele24g1037 186 SUPERFAMILY L30e-like 18 121 IPR029064 -
Lele24g1037 186 ProSitePatterns Ribosomal protein S12e signature. 26 44 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele24g1037 186 PRINTS Ribosomal protein S12E family signature 44 60 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele24g1037 186 PRINTS Ribosomal protein S12E family signature 110 123 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele24g1037 186 PRINTS Ribosomal protein S12E family signature 30 43 IPR000530 GO:0003735|GO:0005840|GO:0006412
Lele24g1037 186 PRINTS Ribosomal protein S12E family signature 85 106 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1037 Lele-ChrLele24 7720300 7721561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1037 19 121 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 77.670 1.33e-55 171