Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1036 ATGTCCCGAGGTGTCGCCGGAGCCGGAGACCCAGGCCTCCTTCCGATGGGGTTGTCGTTGGGCGGCGGAGAAGTTGACCGCTCCAGACACGACGTCGTGGATGGGTCGTCGTTCAAATCTCCTAATCAGGATGGCGATACTGCAGTTCAAGCCCTGTATAACGGGTTCGCCGGTTCTCTGCATGGCGGAGGTCAGGTTTCGAATCAGACTCAGCATTTTCCTCACCCACAGAATATGGGCAGTTCAGGCGGCGCAACGAGCCAAGCTCCGGCCAGCAGTACTCCGGCACAACCTCGGCAGAGAGTTAGGGCGAGGAGAGGTCAAGCGACGGACCCTCACAGCATTGCCGAGAGGTTACGAAGGGAGAGAATCGCAGAGAGAATGAAGGCATTGCAGGAGCTTGTTCCCAATGCTAACAAGATAGACAAGGCGTCGATGCTGGATGAGATAATCGATTATGTGAAGTTCCTACAGCTCCAAGTGAAGGTATTGAGTATGAGTAGGTTGGGCGGTGCCGCTGCTGTGGCTCCTCTGGTTGCTGATATGGCCTCTGAGAAGGCAGCCGGTACGGGAGGAGACTGCATCCAGGCCACTGCCAACGGTGGTGGTGGTGGGGCTCTCCCTGGGACCTCCAACGGCAACCAGACTCCGCCGTCGAACTCCAACAACGACAGCATCACCATGATGGAGCACCAGGTGGCCAAGCTCATGGAGGAAGACATGGGCTCCGCCATGCAGTACCTGCAGGGGAAGGGGCTCTGCCTCATGCCCATCTCCTTCGCCACCGCCATCTCCACCGCCACGTGTCATTCCAGGAGCCCCCTCATCCACAACAACCAGAAAGGTCCGTCGTCACCCAGCATGTCGGTCTTGACCGTGCAGTCGGCGACGGCGGGTAACGGTGCCCCGGGTGCCTCCGTGAAAGAGGTGGCCTCCGTTTCAAAGCCGTGA 951 0.5899 MSRGVAGAGDPGLLPMGLSLGGGEVDRSRHDVVDGSSFKSPNQDGDTAVQALYNGFAGSLHGGGQVSNQTQHFPHPQNMGSSGGATSQAPASSTPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKIDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMASEKAAGTGGDCIQATANGGGGGALPGTSNGNQTPPSNSNNDSITMMEHQVAKLMEEDMGSAMQYLQGKGLCLMPISFATAISTATCHSRSPLIHNNQKGPSSPSMSVLTVQSATAGNGAPGASVKEVASVSKP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1036 316 MobiDBLite consensus disorder prediction 203 223 - -
Lele24g1036 316 MobiDBLite consensus disorder prediction 276 316 - -
Lele24g1036 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 157 IPR011598 GO:0046983
Lele24g1036 316 MobiDBLite consensus disorder prediction 60 113 - -
Lele24g1036 316 Pfam Helix-loop-helix DNA-binding domain 113 158 IPR011598 GO:0046983
Lele24g1036 316 MobiDBLite consensus disorder prediction 276 301 - -
Lele24g1036 316 FunFam Transcription factor bHLH66 105 170 - -
Lele24g1036 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 106 168 IPR036638 GO:0046983
Lele24g1036 316 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 43 264 - -
Lele24g1036 316 MobiDBLite consensus disorder prediction 1 46 - -
Lele24g1036 316 MobiDBLite consensus disorder prediction 61 99 - -
Lele24g1036 316 Gene3D - 103 165 IPR036638 GO:0046983
Lele24g1036 316 SMART finulus 114 163 IPR011598 GO:0046983
Lele24g1036 316 MobiDBLite consensus disorder prediction 205 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1036 Lele-ChrLele24 7707469 7710151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1036 95 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 62.185 2.05e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele24g1036 HLH 1.4e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1059 22 7620583 7623296 Lele24g1036 24 7707469 7710151 hybridization