Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1033 ATGGGTGAGAAAGCCAAAGATTCTAGCCATTCCGCGTTGCTTCACGGGAAGTACGAGCTCGGTCGTCTTCTGGGTCACGGCACTTTCGCCAAGGTCTACCATGCGAAGAACTTGCAGACCGAGAAAAGCGTGGCTCTGAAGGTGGTTGGCAAAGAGAAAGTGATTAAAGTGGGCATGATGGAGCAAATCAAGAGGGAGATTTCAGTGATGAAGATGGTGGAGCATCCGAACATCGTTGAGCTGCATGAGGTTATGGCGAGCAAATCCAAGATCTATATCGCTATGGAGCTCGTTCGAGGCGGCGAACTCTTCAACAAGATCACCAGAGGCCGCCTGAGGGAAGACGTGGCACGAGTCTATTTCCAGCAGTTGATCTCCGCCATTGATTTCTGCCACAGTCGCGGCGTTTACCACCGCGATCTCAAGCCAGAGAATCTGCTTCTCGACGAGGATGGGAATTTGAAGGTCACTGATTTTGGCCTGAGCACGTTTGCTGATCACTTGCGGCAAGATGGGTTGCTTCACACCACTTGTGGCACTCCGGCGTACGTGGCGCCGGAGGGGAGACTTCAAATGCCCGCCGTGGTTCTCCTCCGACGCTCGCCGGCTGATAACAAAGCTCCTCGACCCGAACCCGAGTACCCGAATCTCCATTTCCAAAATCATGGACTCGCCCTGGTTCAAAAAATCCATCCCCAAGAGCATGGTGACGAAGGAGGAAAAGGAATTCGATTTTGA 738 0.5271 MGEKAKDSSHSALLHGKYELGRLLGHGTFAKVYHAKNLQTEKSVALKVVGKEKVIKVGMMEQIKREISVMKMVEHPNIVELHEVMASKSKIYIAMELVRGGELFNKITRGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVTDFGLSTFADHLRQDGLLHTTCGTPAYVAPEGRLQMPAVVLLRRSPADNKAPRPEPEYPNLHFQNHGLALVQKIHPQEHGDEGGKGIRF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1033 245 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Lele24g1033 245 FunFam Maternal embryonic leucine zipper kinase 6 195 - -
Lele24g1033 245 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 197 - -
Lele24g1033 245 Gene3D Transferase(Phosphotransferase) domain 1 9 204 - -
Lele24g1033 245 FunFam Non-specific serine/threonine protein kinase 9 97 - -
Lele24g1033 245 SUPERFAMILY Protein kinase-like (PK-like) 15 192 IPR011009 -
Lele24g1033 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele24g1033 245 SMART serkin_6 18 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1033 245 Pfam Protein kinase domain 18 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g1033 245 ProSiteProfiles Protein kinase domain profile. 18 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1033 Lele-ChrLele24 7669696 7670567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1033 9 187 CBL-interacting serine-threonine protein kinases AT4G30960 86.592 2.40e-104 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele24g1033 Pkinase 3e-52 CL0016