Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1031 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCCGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGTTTTCGACTGCTGCTTCATGACGGATGCTTGGAATGAAGAAAACTATAAAGTCTACATGGATGGGATTATTGCTCAACTTCGAGAGCACTTCCCTGATGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAACGAAGAGTCAGATGGCTAACATCTTGTCAGAGTATGACATGACTATTATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAGATGGAAGTCATCCACCACTTTTTACGGTCGAGTGAAAGTTGGCTCTCACTTGGGCAGCACAATATTCTGTTGATGCACTGTGAACGTGGTGGCTGGCCTGTTTTGGCTTTCATGCTGGCTGCACTTTTGATTTATCGAAAGCAATATAGCGGAGAACAGAGGACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCATCTTTTGTCACCGTTAAATCCGATTCCTTCCCAACTGCGGTATCTGCAGTATATTTCCAGGAGGAATGTGGCCATAGATTGGCCTCCATTGGACAGGGCGCTCACGTTGGACTGCGTCATTCTCAGATGTTTCCCGGATTTTGATGGGGAAGGTGGGTGTTGTCCAATATTTAGAATTTATGGACAAGATCCTTTTCTTGCAGATAAAACTCCAAAAATCCTGTACTCAACACAGAAGCAAGACAAAACCGTCCGATTTTACAAGCAGGGAGAGAGTGAACTAATCAAAATTGACATCAACTGTCATATACAAGGTGATGTTGTGATTGAAAGCATTAACTTGACCAGTGACATGGACCACGAACGGATGATGTTCCGAGTCATGTTCAACACATCTTTTATTAGGTCTAATATATTGATGCTTAACCTGGATGAAGTTGACATTTTATGGGATTCTAAAGATCAATTCCCCAAGGATTTCAGAGCGGAGATCCTTTTCTCGGAGATGGATGCTGCTGCTGCTGTTATTGCGGATGGTACCTCATGGCTTGAGGAGAAGGAGGGACTCCCAGTGGAGGCATTTGCGAAAGTTCAGGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCTGATGCTGCACTAAATGTACTCCAACAACTTAGTGCTTCAGTGCATGACAAGTTGGATATAATTTCTGCTCAGCAGCATGATACAGGATCTTTGTTGCATGAAGAAGATCCTAAAGTTCCTCAGGGAAACAAGAGTGAAGCTAAAAGGTTATTGCCCATAAATAATGAATCCCAGGTTAGTGCTCTGAGTAATAAAGTAGATGAGCCTATCAAGACCGGTGCTTCTCCAAAACTATCTAGAAACTCTGACATTATCTATCAGAAGATGCCCATTACGTCTATGAGAACCTCAGAGTCCAGTAAACATGTGAAGAGTTCTACAAAGCTTGATGTAAAAGCACAGGTAGATGATCTTGCCTTGTCTAGTTCTCTAGATACTTCTAGCGAATCATTTTCACCAAAAACACCTCCACAGAATCTTTCCTTGACTAGTAATTCTGAAAACGTTCGTGATACTCCACCCAACGCAAAAGTGCCTTCTCATCTTTCCCCTCTAGGACCAGGTTATCCTGTTACTGGAGAAATTAAAGCCCAATCACAAGACAGAATTGAGTCATCGAACTTTAGTTCCACATCTGGAACTTTATTATCAGGTACCTTTCCAAATAAGCTGCCTCTTGATTCTGCTTCCCATTTTTCAGCTTCATCAATGACTTCAACTCAGCCATCTCCTTCGCCTACAACCCCCATGAAGGAGATTCTACCTGTTAGAACTAGACCTGCTTCATCCACTTCACAAGTTCCAACACCACCCACACCCCCAACTCCTCCTCAAAAGGAACATAAACTGGTTAGAGCTGTGCCTCCCCCGCCGCCGCCGCCGCTGCCGCCACCACCACCACCACTTCCACAGAAAGAACAATCACTGGTTAGAGTCATGCCTCCCCCATCCCCACCAAAGGAGGAACCACGTTGTCAACTTGGACCCCCTCCTCCCCAACCACCTCCTCTAAAGGAGGAGCCTAAAGTTAAAACTGGACCACCACCCCCTCCACCACCTCCTCTAAAGGTGGAGCCACCTGTTAGTGCTAAACCTCCTCCTCCTCCTCCTCCTCCTCCATGTCTTGCTGGGAAAGCTGATTCTACCACTGTATCACCACCGCCACCTCCTCCTGCCCCTGCTGCAGCACTCTCCTCCAAGCACTCTAATCCTTCATTGCAGAATTCTACTTCTGCTCCTGCTGCTCCTAATGCTCCATCACCTCCAGTTCCCTTTATTGAAGGAGATAGAAATATTGCGTTTAGTACAACAGGACCCCGAGGACGAATTCTATCTCGTACGATAAGTAGCACCAAAAATCAAAATAAAAAGCTGAAGCCGTTGCATTGGCTGAAAATATCTAGAGCAGTGCAAGGAAGTTTGTGGCATGAGGCAGCGAAATCTGGTGAAGCTGCCAAAGCCCCAGAGATTGATATGTCAGAGCTCGAGAGTCTCTTCTCAGCTGCAGCCCCAAGTTCAGGCGCCAAGATAGTAGGTGCTAAAAGTTCAGCTGGGCCTAAATCTGATAAAGTGCAACTGGTTGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTACATGATTTGATGAGCTCAGTGCTAGCACTAGAGGACTTGGCACTAGACATTGATCAGGTTGAAAACCTTATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTCAAGGGCTATACTGGAGAAAAGGAGAAGTTAGGGAGATGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCACGGGTAGAGTCAAAACTCAGAGTGTTTTCATTCAAGATTCAGTTCCAATCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATATTGTTGATGCTGCTGTAGAAGAGATTAGGAATTCTGTCAAATTGAAGAGAATTATGCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCTAGAGGTTCTGCAATTGGATTTAGATTGGATAGCCTTCTTAGACTTACTGAGATGCGAGCACGGAACATCAAGATGACTCTCATGCATTATCTTTGTAAGGTTTTGGCTGACAAATTACCAGAAGTTCTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCTGCAGCAAAGATCCAACTGAAGTTTATGGCAGAGGAGATGCAAGCTATAAGCAAGGGATTAGAGAAAGTTATCCAGGAACTTTCAATCTCTGAAAATGATGGTCCTATATCTGAGACATTCCGCAAGACTTTGAAAAATTTCCTCCGTTCTGCTGAAGCTGATGTCCGATCACTGGCTTCATTATATTCTGGCGTGGGTAGGAAAGTGGACGCATTGATTGTTTATTTTGGTGAAGATCCGGCTCGCTGCCCTTTTGAGCAAGTTGTGACAACTTTGCTCAACTTCACGAGGATGTTCTACAAAGCCCATGAAGAAAACTGCAAGCAGCTTGAGCTTGAAATGAAGAAATCATCTGATAGTGACAAAAAGACATGTGAATCACAAAGGATACTGCCAACCGTAATCCGGACCGGTAACATCAAATGA 3666 0.4435 MTLLRKLFFRKPPDGLLEICERVYVFDCCFMTDAWNEENYKVYMDGIIAQLREHFPDASILVFNFRQEETKSQMANILSEYDMTIMDYPRQYEGCPVLKMEVIHHFLRSSESWLSLGQHNILLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLHLLSPLNPIPSQLRYLQYISRRNVAIDWPPLDRALTLDCVILRCFPDFDGEGGCCPIFRIYGQDPFLADKTPKILYSTQKQDKTVRFYKQGESELIKIDINCHIQGDVVIESINLTSDMDHERMMFRVMFNTSFIRSNILMLNLDEVDILWDSKDQFPKDFRAEILFSEMDAAAAVIADGTSWLEEKEGLPVEAFAKVQEIFNHVDWLNPKADAALNVLQQLSASVHDKLDIISAQQHDTGSLLHEEDPKVPQGNKSEAKRLLPINNESQVSALSNKVDEPIKTGASPKLSRNSDIIYQKMPITSMRTSESSKHVKSSTKLDVKAQVDDLALSSSLDTSSESFSPKTPPQNLSLTSNSENVRDTPPNAKVPSHLSPLGPGYPVTGEIKAQSQDRIESSNFSSTSGTLLSGTFPNKLPLDSASHFSASSMTSTQPSPSPTTPMKEILPVRTRPASSTSQVPTPPTPPTPPQKEHKLVRAVPPPPPPPLPPPPPPLPQKEQSLVRVMPPPSPPKEEPRCQLGPPPPQPPPLKEEPKVKTGPPPPPPPPLKVEPPVSAKPPPPPPPPPCLAGKADSTTVSPPPPPPAPAAALSSKHSNPSLQNSTSAPAAPNAPSPPVPFIEGDRNIAFSTTGPRGRILSRTISSTKNQNKKLKPLHWLKISRAVQGSLWHEAAKSGEAAKAPEIDMSELESLFSAAAPSSGAKIVGAKSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLHDLMSSVLALEDLALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFQSQVSDLRKSLNIVDAAVEEIRNSVKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLRLTEMRARNIKMTLMHYLCKVLADKLPEVLDFSKDLANLEPAAKIQLKFMAEEMQAISKGLEKVIQELSISENDGPISETFRKTLKNFLRSAEADVRSLASLYSGVGRKVDALIVYFGEDPARCPFEQVVTTLLNFTRMFYKAHEENCKQLELEMKKSSDSDKKTCESQRILPTVIRTGNIK 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1031 1221 MobiDBLite consensus disorder prediction 671 735 - -
Lele24g1031 1221 Gene3D Formin, FH2 domain 804 1190 IPR042201 -
Lele24g1031 1221 ProSiteProfiles Formin homology-2 (FH2) domain profile. 807 1205 IPR015425 -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 502 532 - -
Lele24g1031 1221 SUPERFAMILY Formin homology 2 domain (FH2 domain) 881 1196 - -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 625 664 - -
Lele24g1031 1221 SMART PTEN_C2_2 197 336 IPR014020 -
Lele24g1031 1221 SMART it6_source 807 1216 IPR015425 -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 407 464 - -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 557 574 - -
Lele24g1031 1221 Pfam Formin Homology 2 Domain 809 1179 IPR015425 -
Lele24g1031 1221 Gene3D - 196 340 - -
Lele24g1031 1221 Coils Coil 1180 1200 - -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 427 444 - -
Lele24g1031 1221 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Lele24g1031 1221 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Lele24g1031 1221 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 757 773 - -
Lele24g1031 1221 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 408 422 - -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 586 606 - -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 502 574 - -
Lele24g1031 1221 PANTHER FORMIN-J 1 696 - -
Lele24g1031 1221 MobiDBLite consensus disorder prediction 586 808 - -
Lele24g1031 1221 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1031 Lele-ChrLele24 7628046 7636271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1031 771 1203 Protein tyrosine phosphatase (PTP) family AT5G58160 68.265 0.0 603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1037 21 7436176 7443936 Lele24g1031 24 7628046 7636271 hybridization
Lele22g1054 22 7538641 7547780 Lele24g1031 24 7628046 7636271 hybridization