Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1008 ATGCAGCAAGGGGATCAAACGGTGATAAGCTTGAGGCCTGGTGGTGGTCGAGGCGGCGGCGGTGGAAGCAGACTATTCGGTCGTCGATACGAGTCCTCGTCGTCCACATCTTCTTTCCCTGCTTTCGGATCCTTCTCCTCTGATCTCCCTGTCTTGCGCCCCGATGGCGGTGCTCCATCATCATTCTCTATAAAGGCTGGTGATTCACGGTTTGAAGGTCGGGAGCGGGTGCGATACACCAGAGATCAACTGTTACAGCTTAGAGAGGCTGTTGAGGTCCCTGATGATATTATAAAAATCAAACAAGATATTGAAGCTGAGCTTTTTGGTGAAGATCAAAGCTGGGTTCGTTTGGAAAGCAATGCCCCACATCAATTTCAAAATCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGTCGGTCTGGACAACTTTCTCCTGCTGAAGAAAGATATTGGGACAATAGAGAATTTGGCAATCGATATGACTCAAGACAGCCAGATGCCAGCCAGATTAATCGCCAAGACCAACAGGGTTTGCAGTTTGCTAAGGGAGGACCTGCTCCTACTCTAGTGAAGGCTGACGTGCCATGGTCAGCTAGAAGGGGAAGTCTTTCCGACAAGGATCGTGTCTTGAAGACTGTGAAAGGGATTCTAAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAATTGATTGATTCTGGCATTACATCAGCAGACATCTTGAAGGATGTTATTTCACTTATATTTGATAAGGCGGTGCTTGAACCAACATTTTGCCCCATGTATGCTCTTCTGTGTTCTGATCTTAATGAAAAGTTGCCACCATTCCCTTCTGAAGAACCTGGTGGCAAAGAGATCACTTTTAAGAGAGTGCTCTTAAATAACTGCCAGGAGGCCTTTGAAGGTGATGATAAATTGAGGGAAGAAGTTAGGCAGATGACTGGCCCTGAGCAGGAGATGGAACGCCGTGATAAGGAAAGACTAGTCAAGCTTCGTACTTTGGGAAACATTCGATTAATTGGGGAGCTCCTAAAGCAGAAGATGGTTCCTGAAAAAATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCACCTGATAGCAAGGCCTGTCCTGTTGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACTATCGGTAAGCAGCTTGATGAAAGCCCAAAATCACGACGTATAAATGATATGTACTTTAGCCGATTGAAAGAATTGAGTGCTAATCCTCAACTCATACCGCGGTTGAGGTTCATGATTCGTGATGTTCTAGATTTGCGTGTGAATAACTGGGTTCCAAGGCGTGAAGAGATAAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCTGAAAAAAATCTTGGATTGCGCCCAGGTGCCACTGCAAACATTAGAAATCCCCGTAATGTTCAAGGAAATGCCACTCCTGGGGGATTCCCAATTGCTGCACCTGGTACTGGCGGTATGATGCCTGGAATGCCAGGGACCAGGAAGATGCCGGGGATGCCTGAAATGGATAATGACAATTGGGAGATCCCTAGGAATCGGTCAATGCCGAGAGGAGAAATGTCAGCTGGGCTACCAACTGCACGTGGTCAGTCTCCTTTAATTTCCAAGTCAGCAGCCATGAGTTCAAAGTTGCTACCTCAAGGCGGTGGTGGTTTTATAAGTGGAAGAAGTAGTGCCCTGGCTCATGGAGGTGGTGGTGCTCCTCCCTGTCCCTCAAGCTTTGGTTCAGATGCTGAGGCTCCACCTGTTAAAGTTGCTCCTGCCTTGTCCTCTCAGAAACCACTGTCTCCTGCGCCAAAAATGAATACCGATGACCTTCAGCACAAAACCCGATATCTTCTAGAAGAATATTTTAGTGTTAGGCTTTTAGGCGAGGCATTACAGTGTGTAGAGGAACTAAAATCCCCAGCTTACCACCCTGAGGTTGTCAAGGAAGCCATTTACCTGGCACTAGATAAAAGCCCACCATTCGTTGAACCTGTTGGCAATCTTCTGGAGTATTTCCTCATCAAAAGTGTTCTTACCGCTAGAGACTTAGGCACCGGGTGTTTGTTATTTGCTTCCATGCTAGACGATATTGGCATAGATTTACCAAAAGCTCCAAACAACTTCGGTGAGATAATTGGGAAACTGATTTTAGCCGGGGGATTGGATTTTAAGGTGGTGAAAGAGATTCTTAAGAAGGTTGAAGATGACTTGTTCCAGAAAGCTATATTCGATGCTGCGCTACGGGTCATTGCCTCATCATCTGGGCAAGCTGTTTTGGAGTCACAAGCATCTGATGTCGAAGCCTGCCGGAGTATGTTGAAGTGA 2346 0.4612 MQQGDQTVISLRPGGGRGGGGGSRLFGRRYESSSSTSSFPAFGSFSSDLPVLRPDGGAPSSFSIKAGDSRFEGRERVRYTRDQLLQLREAVEVPDDIIKIKQDIEAELFGEDQSWVRLESNAPHQFQNRYSEPDNRDWRGRSGQLSPAEERYWDNREFGNRYDSRQPDASQINRQDQQGLQFAKGGPAPTLVKADVPWSARRGSLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPGGKEITFKRVLLNNCQEAFEGDDKLREEVRQMTGPEQEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKACPVEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSANPQLIPRLRFMIRDVLDLRVNNWVPRREEIKAKTITEIHSEAEKNLGLRPGATANIRNPRNVQGNATPGGFPIAAPGTGGMMPGMPGTRKMPGMPEMDNDNWEIPRNRSMPRGEMSAGLPTARGQSPLISKSAAMSSKLLPQGGGGFISGRSSALAHGGGGAPPCPSSFGSDAEAPPVKVAPALSSQKPLSPAPKMNTDDLQHKTRYLLEEYFSVRLLGEALQCVEELKSPAYHPEVVKEAIYLALDKSPPFVEPVGNLLEYFLIKSVLTARDLGTGCLLFASMLDDIGIDLPKAPNNFGEIIGKLILAGGLDFKVVKEILKKVEDDLFQKAIFDAALRVIASSSGQAVLESQASDVEACRSMLK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1008 781 Pfam MIF4G domain 212 438 IPR003890 GO:0003723|GO:0005515
Lele24g1008 781 SUPERFAMILY ARM repeat 206 441 IPR016024 -
Lele24g1008 781 Gene3D - 609 778 - -
Lele24g1008 781 SMART ma3_7 617 729 IPR003891 -
Lele24g1008 781 MobiDBLite consensus disorder prediction 28 42 - -
Lele24g1008 781 MobiDBLite consensus disorder prediction 566 592 - -
Lele24g1008 781 MobiDBLite consensus disorder prediction 156 175 - -
Lele24g1008 781 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 68 769 IPR045208 GO:0003743
Lele24g1008 781 MobiDBLite consensus disorder prediction 126 146 - -
Lele24g1008 781 SMART if4_15 212 438 IPR003890 GO:0003723|GO:0005515
Lele24g1008 781 MobiDBLite consensus disorder prediction 1 42 - -
Lele24g1008 781 Coils Coil 779 781 - -
Lele24g1008 781 SUPERFAMILY ARM repeat 610 763 IPR016024 -
Lele24g1008 781 Pfam MA3 domain 618 729 IPR003891 -
Lele24g1008 781 ProSiteProfiles MI domain profile. 616 738 IPR003891 -
Lele24g1008 781 FunFam Eukaryotic translation initiation factor isoform 4G-2 203 439 - -
Lele24g1008 781 FunFam Eukaryotic translation initiation factor isoform 4G-2 610 771 - -
Lele24g1008 781 Gene3D - 204 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1008 Lele-ChrLele24 7407483 7412874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1008 1 779 Eukaryotic Initiation Factors Gene Family AT5G57870 64.070 0.0 945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g1008 24 7407483 7412874 Lele24g1008 24 7407483 7412874 ECH
Lele21g1017 21 7238677 7244065 Lele24g1008 24 7407483 7412874 hybridization
Lele22g1035 22 7365990 7371345 Lele24g1008 24 7407483 7412874 hybridization