Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1005 ATGGTGAAGAAATGCATTATTAGGATGAATAAGGAAAAGAGGTCTCACAACAACAACGAGCTTGTGGTCATACAAGGACATGAAGAAGAGCATAAGCCAGTCAAGAACTTAGATGGTCAGCTATGTGATATATGTGGTGATTCTGTGGGGTATACAGTGGATGGAGATTTGTTTGTGGCCTGTGAAGAGTGTGGTTTCCCTGTTTGCAGGCCATGTTATGAGTATGAAAGAAGAGAAGGGGCTCAAGTTTGCCCTCAGTGCCAGACCAGATACAAGCGAATCAAAGCTTTTAATTATCCTTGTTTGGCTTTGAAAGGAAGCCCAAGGGTTGAGGGAGATGAAGATGAAGATGACGTGGATGATATTGAACATGAGTTCAAAATGGAAGAAGAGAAGCACAAGCTCATTATAGGCCGGGTAGATGATGACGAGAATGCTAAATTACCAGTAGTAATAGCCAAGGTTAATGGAGAGATTCCCATTATTGGAGAACCTGGAAAAGCAAAGTTGGATGAGAAGACACAGATAACAGATGACTGGAAGATGAATCAAGGAAATCTGTGGCCTGAAACTGATGCATCAGTTGATCCTGAAAAGGCCATGAGAGAGGAAGCTAGGCAACCTCTCTCAAGGAAAGTAGCAATACCATCAGGCAGACTCAGCCCTTACAGGATGATGGTCGCGGCTCGGCTTATGATTCTACTATTGTTCCTTCAGTATAGAGTCCTACATCCGGTGCCTGACGCGGTTGGACTCTGGCTTACATCTGTAATATGTGAAATATGGCTTACATTGTCTTGGATAATAGATCAGATTCCCAAATGGTTTCCCATTGACCGGGAGACATACCTTGATCGGCTTTCACTCAGGTTTGAACCAGAGAACAAGCCGAATTTGTTTCCTCCAATAGATATCTTTGTCACTACTGTGGATACAATTAAGGAACCTCCACTAGTTACAGCTAATACAGTTCTTTCAATCTTGGCCATGGATTACCCTGCTAGTAAAATCTCATGCTATGTTTCTGATGATGGAGCTTCCCTGCTTACATTTGAAGCTCTCCAAGAAACTGCAGAGTTTGCACGGAAGTGGGTGCCCTTCTGCAAAAAATATTCCATAGAGCCTCGAGCACCAGAGAAGTACTTCTCAGAGAAGATTGATTTTCTAAAGGATAAGGTCCAGTCTACTTATGTCAGAGACCGCCGTACCATGAAGAGAGAATATGAAGAATTCAAGGTTAGGATAAATGCACTTGTGGCTAAATCCATGAGAGTTCCCCAAGAAGGGTGGACTGTGCAAGATGGGACACCATGGCCAGGAAACAATACCAATGATCACCCAGGGTTTCAACACCACAGCAAAGCCGGAGCCTTGAATGCATTGCTTCGGGTATCTGCATTGCTAAGCAATGCTCCTTTTGTGCTGAACTTGGATTGCAATCACTATGTGAACAATAGCAAGGCTGTGAGAGAGTCCATGTGTTTCTTCATGGACCTACAAGTTGGAAAGAGCATTTGCTTTGTCCAGTTCCCGCTAAGATTCGATAGCCTCGATAAGCATGATCGTTATGCCAACAGAAACACTGTTTTATTCGATATAAACTTGAGGTGCCTAGATGGAATTCAAGGACCTATTTATATTGGTTCAGGATGTATTTTTAGGAGGAAAGCTTTAAATGGAAGTGATCCTCCGAAGACTTCAAAGAGCCCGAAAATGGTAGGTTGTAGCTGCTGTCCTTGTTTTGGATCGCGCAAGAAGCTACAAGTGCACTCTAAGCATGATGATGGCAATGAAGATGATCCAACCTTGACAGGAACAGAAGAAAACAAGGAGCTTTTAACATCGGAGATGAATTTTGAAAATAAATTTGGGAAATCTGCAGATTTTGTTAACTCTTCCATAATGGAAGAGGGAGGTACTCCTTCTACCTCTAATCAGGCAGCCTTACTTAAAGAAACCATTCATGTCATGAGTAGCAGCTACGAAGACAGAACCCTATGGGGATACGAGGTATTACCGACATCTCCTTTTGATTTGCCCTTGTCTATTGCAGATGAAAAGGTTAACTTACTGCTGAAGCAATGCTTCAACCAATTTTCTCATCTAAAGGTAGGTTGGAACTATGGATCTATATCATCAGATATTCTGACAAGTTTCAAAATGCACTCTCTTGGTTGGAGATCTGTGTATTGCATGCCAGAAAGACCTGCTTTTAGGGGAACCGCTCCGATCAACCTTTCCGATCGACTCAGTCAGGTGCTTAGATGGGCACTTGGATCACTTGAGATCCTTTTCAGCCGCCATTGCCCAATATGGTACACCTTAGGTGAAGGAAAACTTAAGGGGCTTCAAAGAATTGCCTATATCAACAGCACTGTTTACCCTTTCAGCTCAATACCTCTTCTAGTATATTGTCTCCTTCCTGCCGTCTGCCTGCTCACAGACAAGTTCATCACACCTTCGATAAGCACCTTAGCAAGTCTTCTCTTTATTGCACTGTTCATCTCAATCTTTGCCTCAAGCATTCTTGAGTTAAGATGGAGTGGAGTCACACTTGAGGAATGGTGGAGAAATGAGCAATTCTGGGTTATTGGCAGCATCTCAACACACATCTTTGCAATTGTGAGAAACTTTCTGAAATCTGTGTCCAAAATTGATACTAACTTCGGCGTCGTATCGAAAGTACCAGACGATGGCGAATTCAATGATCTCTACACCTTTAGATGGACAGCACTGCTAATACCTCCAACCACTATCATAATCATCAACCTTGTTGGTATTGTAGCTGGGTTTACAGATGCAATAAACAGTGGTGGACATTCTTGGGGAGCATTACTGGGAAAACTCTTCTTCTCATTCTGGGTTCTGGTTCATCTTTACCCATTCCTCAAAGGGATGATGGGAAAGCAGAACAGAACACCAACCCTTGTTATTATATGGTCAGTGCTTTTGGCTTCTATCTTCTCTTTGCTTTGGGTGAGAATTGATCCTTTTGTGTTGAAAACTAAAGGACCTGATGTTAAGCAGTGTGGAATCAGTTGCTGA 3045 0.4266 MVKKCIIRMNKEKRSHNNNELVVIQGHEEEHKPVKNLDGQLCDICGDSVGYTVDGDLFVACEECGFPVCRPCYEYERREGAQVCPQCQTRYKRIKAFNYPCLALKGSPRVEGDEDEDDVDDIEHEFKMEEEKHKLIIGRVDDDENAKLPVVIAKVNGEIPIIGEPGKAKLDEKTQITDDWKMNQGNLWPETDASVDPEKAMREEARQPLSRKVAIPSGRLSPYRMMVAARLMILLLFLQYRVLHPVPDAVGLWLTSVICEIWLTLSWIIDQIPKWFPIDRETYLDRLSLRFEPENKPNLFPPIDIFVTTVDTIKEPPLVTANTVLSILAMDYPASKISCYVSDDGASLLTFEALQETAEFARKWVPFCKKYSIEPRAPEKYFSEKIDFLKDKVQSTYVRDRRTMKREYEEFKVRINALVAKSMRVPQEGWTVQDGTPWPGNNTNDHPGFQHHSKAGALNALLRVSALLSNAPFVLNLDCNHYVNNSKAVRESMCFFMDLQVGKSICFVQFPLRFDSLDKHDRYANRNTVLFDINLRCLDGIQGPIYIGSGCIFRRKALNGSDPPKTSKSPKMVGCSCCPCFGSRKKLQVHSKHDDGNEDDPTLTGTEENKELLTSEMNFENKFGKSADFVNSSIMEEGGTPSTSNQAALLKETIHVMSSSYEDRTLWGYEVLPTSPFDLPLSIADEKVNLLLKQCFNQFSHLKVGWNYGSISSDILTSFKMHSLGWRSVYCMPERPAFRGTAPINLSDRLSQVLRWALGSLEILFSRHCPIWYTLGEGKLKGLQRIAYINSTVYPFSSIPLLVYCLLPAVCLLTDKFITPSISTLASLLFIALFISIFASSILELRWSGVTLEEWWRNEQFWVIGSISTHIFAIVRNFLKSVSKIDTNFGVVSKVPDDGEFNDLYTFRWTALLIPPTTIIIINLVGIVAGFTDAINSGGHSWGALLGKLFFSFWVLVHLYPFLKGMMGKQNRTPTLVIIWSVLLASIFSLLWVRIDPFVLKTKGPDVKQCGISC 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1005 1014 Pfam Zinc-binding RING-finger 32 119 IPR027934 -
Lele24g1005 1014 SUPERFAMILY Nucleotide-diphospho-sugar transferases 314 837 IPR029044 -
Lele24g1005 1014 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 292 393 IPR029044 -
Lele24g1005 1014 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 394 562 IPR029044 -
Lele24g1005 1014 ProSiteProfiles Zinc finger RING-type profile. 42 88 IPR001841 -
Lele24g1005 1014 SUPERFAMILY RING/U-box 26 122 - -
Lele24g1005 1014 Pfam Cellulose synthase 703 1008 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele24g1005 1014 Pfam Cellulose synthase 447 671 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele24g1005 1014 CDD mRING-HC-C4C4_CesA_plant 40 90 - -
Lele24g1005 1014 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 124 IPR013083 -
Lele24g1005 1014 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 703 981 - -
Lele24g1005 1014 Coils Coil 401 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1005 Lele-ChrLele24 7380519 7387351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1005 15 1014 Cell Wall Biosynthesis AT5G17420 62.653 0.0 1346