Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0999 ATGGGTTTGTGTAGATTTTCATTATTTGCGTTTTTCTCTGTGGTCGTGGTTCATTTAGGAGTTCATGGGGAAGAAAATGCCGACCTGGTGTATGATAAAAGTACTCTGAGATCATTCATGAGGGGCACTGTTTCTGACCCAAAGAACGCTCTGGCGAGCTGGAAATCTCCTGATATTCATGTCTGTAATTGGTCAGGGATAAGATGCAACAATGCAAGTTACAGAAGAGTCATAGAGATTGATCTCCATGGAAAATCATTAGGAGGCACAATTTCCCCTGCTATTTCCAACCTTACTTCCTTGAAAATTCTAGATCTTTCTGAGAATTTCTTCGTGGGTCATATTCCAAAAGAGTTAGGCTTCTTAACTCAACTGGGGCAACTCAGTTTATCTTGGAATTTTCTTCAAGGAGAAATTCCAACTGAGTTGGGTTCACTTCATAACTTATATTACCTTGACATGGGAAGCAACCAGCTTGAAGGTGAGATTCCAGAATCACTTTTCTGTAATGGGTCTTCTTCCTCATTGAGGTATATAGATCTCTCAAACAATTCCTTAATGGGACATATCCCATTGAACAATAAGTGCATGCTTCTAGAAGTTAGGTTCCTCTTACTTTGGTCTAATAAGCTTGTAGGCCAAATTCCTTTAGTTCTTTCTAACTCTACACAGCTAAAATGGCTTGATTTGGAGTCAAATATGCTGAGTGGTGAGTTATCACATGAGATTGTAAGTTGGCCTGAACTACAGTTCCTTTATTTGTCTGATAATCACTTTGTTAGCCATGATGGAAACACAAATCTTGAACCTTTCTTTGCTTCTTTGAGAAATTTATCTAACCTTCAAGAACTTGAATTAGCAGAAAACAATCTTGGTGGGAAGCTTCCTTCTAACATTGGTGACCTTCCTAAAAGCCTTGTTCAGCTTCACCTTGATAACAATCTCATTTATGGCCATATTCCTCCTCAAATATCCAACCTTGTTAACCTGACTCTACTGAATTTTTCTAGTAATCTGCTAAATGGATCTGTTCCTTCTAGCCTATGGAAGATGGGAAAGCTTGAGAGAATCTATTTGTCCAATAATTCACTATCTGGTGAGATTCCTTCAGAACTTGGTGGAATTCAACATCTGGGCCTTCTAGACTTGTCAAGAAACAAGCTTTCTGGTTCTATACCAGATAGTTTTGCTAACCTTCCTCAGTTAAGAAGGCTTTTGCTGTATGAAAACCGGCTTTCTGGAACGATTCCACCAAGTCTTGGAAAATGCGTCAATTTGGAGATTTTGGACCTATCTAGAAACAGAATTTCCGGGGTGATTCCTACAGAAGTCGCCGCCTTGACTAGCTTGAAACTATACTTGAACTTATCAAGCAACAACTTGAATGGCCCTTTACCATTAGAGCTCAGCAAAATGGACATGGTGCTAGCTATTGATTTATCTAACAACAATCTCTCAGGAAGAATCCCAGCTCAGCTTGAAAGCTGCATAGCTCTAGAATACCTTAACCTTTCTGGTAACTCCTTAGAAGGCCCTCTTCCTTTTTCATTAGGCCAATTGCCTTATATAAAGGCACTTGATGTCTCTTCAAATAGGTTAACTGGGCCAATACCAGAGTCCCTTCTGTTATCATCCACTCTGAAGAAACTCAATTTCTCCTTCAACAAGTTCTCAGGGAATATACCAAACGAGGGAGCAATTTCATCTCTCACCATAGACTCTTTCCTTGGAAATGATGCTCTATGTGGTTCCATAAAAGGGATGAAAAGCTGCCACAAGAAACACAGCTATCACTTTGTTCTCCTTATAATTCCAGTGTTTTTATTTGCTACTCCCCTCTTGTGCATGTTCGGCTACCGATTGGCACCCATGGTGAAATTTCGAAGGCGACTAGCGATATTTGGGAGAAATGACTATGAGAGTGATGAGGAGGAAACAAAGGAGCTAGAGTACCCAAGCATTTCATATAAAAAACTTATTGAAGCCACTGGAGGCTTCAGTGCTTCAAGCTTAATTGGTTCAGGAAGATTTGGGCATGTCTACAAAGGAGTCCTTAGAGATAACACCAGAATAGCAGTGAAGGTGATAGATGCTGCCACAGCGGGAGAATTTTCCTGGAGTTTTAGAAGAGAGTTTCAAATTTTGAGAAGGACTAGGCACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAAAGTTTAAGGCTTTTGTTCTTCCTCTAATGCCAAATGGAAGCCTTGAGAGGCATCTATATCCAAGCCATGGGTTGAGCCAAAGGTTGAATTTAGTTCAGTTAGTGAGGATATGTAGTGATGTGGCTGAAGGAATGGCCTATTTGCACCATTACTCACCAGTAAGAGTGATCCACTGCGATCTCAAGCCGAGCAATATACTTCTCGACGACGATATGACAGCTTTGGTTACTGATTTTGGAATTTCAAGGCTCGTGAAAGGCGATGAGAGTATGGCCTCGAATAATAATAGCTCGGCATCTCTCAGTTCAACACATGGCTTGTTATGTGGTTCTGTTGGCTATATAGCCCCTGAGTATGGAATGGGGAAAAAAGCATCAACACAAGGTGATGTATACAGTTATGGAGTATTACTACTAGAAATAGTGACAGGTAGGCCTCCAACAGATGTTCTTGTCCATGAAGGCTCAAGTTTGCATGAGTGGGTGAAGAGACAGTACCCGTACAAGCTTGACAACGTTGTTGAGAAGGCATTACAAAGGTTGTCACATTCACATTATGGGCAACAACATGACAGTAGCAAAATCTGGCAAGATGTTGTACTTGAACTCATAGAACTGGGACTTCTCTGCACGCAGTATAATCCTCTGACAAGGCCAAGCATGATGGATGTGGCTCAAGAAATAGGAAGGTTGAAGGACTACTCGTGTAATTCATCTTCTTATGATGAAGCAGTCAACTCTAAGGCTGATGATTCCTTTTGTAGTGAAGATAATTTACTTGAAAAGTAA 2988 0.406 MGLCRFSLFAFFSVVVVHLGVHGEENADLVYDKSTLRSFMRGTVSDPKNALASWKSPDIHVCNWSGIRCNNASYRRVIEIDLHGKSLGGTISPAISNLTSLKILDLSENFFVGHIPKELGFLTQLGQLSLSWNFLQGEIPTELGSLHNLYYLDMGSNQLEGEIPESLFCNGSSSSLRYIDLSNNSLMGHIPLNNKCMLLEVRFLLLWSNKLVGQIPLVLSNSTQLKWLDLESNMLSGELSHEIVSWPELQFLYLSDNHFVSHDGNTNLEPFFASLRNLSNLQELELAENNLGGKLPSNIGDLPKSLVQLHLDNNLIYGHIPPQISNLVNLTLLNFSSNLLNGSVPSSLWKMGKLERIYLSNNSLSGEIPSELGGIQHLGLLDLSRNKLSGSIPDSFANLPQLRRLLLYENRLSGTIPPSLGKCVNLEILDLSRNRISGVIPTEVAALTSLKLYLNLSSNNLNGPLPLELSKMDMVLAIDLSNNNLSGRIPAQLESCIALEYLNLSGNSLEGPLPFSLGQLPYIKALDVSSNRLTGPIPESLLLSSTLKKLNFSFNKFSGNIPNEGAISSLTIDSFLGNDALCGSIKGMKSCHKKHSYHFVLLIIPVFLFATPLLCMFGYRLAPMVKFRRRLAIFGRNDYESDEEETKELEYPSISYKKLIEATGGFSASSLIGSGRFGHVYKGVLRDNTRIAVKVIDAATAGEFSWSFRREFQILRRTRHRNLIRIITICSKPKFKAFVLPLMPNGSLERHLYPSHGLSQRLNLVQLVRICSDVAEGMAYLHHYSPVRVIHCDLKPSNILLDDDMTALVTDFGISRLVKGDESMASNNNSSASLSSTHGLLCGSVGYIAPEYGMGKKASTQGDVYSYGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYKLDNVVEKALQRLSHSHYGQQHDSSKIWQDVVLELIELGLLCTQYNPLTRPSMMDVAQEIGRLKDYSCNSSSYDEAVNSKADDSFCSEDNLLEK 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0999 995 SMART LRR_typ_2 98 122 IPR003591 -
Lele24g0999 995 SMART LRR_typ_2 146 170 IPR003591 -
Lele24g0999 995 SMART LRR_typ_2 399 423 IPR003591 -
Lele24g0999 995 SMART LRR_typ_2 375 398 IPR003591 -
Lele24g0999 995 SMART LRR_typ_2 278 302 IPR003591 -
Lele24g0999 995 SMART LRR_typ_2 327 350 IPR003591 -
Lele24g0999 995 SMART LRR_typ_2 351 374 IPR003591 -
Lele24g0999 995 SUPERFAMILY RNI-like 79 365 - -
Lele24g0999 995 Gene3D Ribonuclease Inhibitor 199 264 IPR032675 -
Lele24g0999 995 SMART serkin_6 666 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0999 995 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Lele24g0999 995 Gene3D Ribonuclease Inhibitor 31 198 IPR032675 -
Lele24g0999 995 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 743 973 - -
Lele24g0999 995 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 272 368 - -
Lele24g0999 995 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 369 465 - -
Lele24g0999 995 ProSiteProfiles Protein kinase domain profile. 666 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0999 995 Pfam Leucine Rich Repeat 499 518 IPR001611 GO:0005515
Lele24g0999 995 Pfam Leucine Rich Repeat 353 372 IPR001611 GO:0005515
Lele24g0999 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Lele24g0999 995 Gene3D Transferase(Phosphotransferase) domain 1 743 987 - -
Lele24g0999 995 Gene3D Phosphorylase Kinase; domain 1 637 741 - -
Lele24g0999 995 Pfam Protein kinase domain 668 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0999 995 SUPERFAMILY L domain-like 275 575 - -
Lele24g0999 995 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 469 591 - -
Lele24g0999 995 ProSitePatterns Protein kinases ATP-binding region signature. 672 694 IPR017441 GO:0005524
Lele24g0999 995 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 380 961 - -
Lele24g0999 995 FunFam Leucine-rich repeat receptor-like protein kinase 30 192 - -
Lele24g0999 995 CDD STKc_IRAK 672 964 - -
Lele24g0999 995 Gene3D Ribonuclease Inhibitor 265 599 IPR032675 -
Lele24g0999 995 SUPERFAMILY Protein kinase-like (PK-like) 645 959 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0999 Lele-ChrLele24 7320227 7324372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0999 32 966 Receptor kinase-like Gene Family AT3G47570 34.078 1.63e-155 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele24g0999 Pkinase 3e-44 CL0016