Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0977 ATGAGCAGTGGAAACCGAGTTTTGGTGTGTAAATCAGTTTCCCTCTTCTTCACCCTACCTTCCTGTCTTTCTTGCACTCAACTTCGATCCAAATTCGTTGCAGCTCGCGCCTGGTCTCCCGCTGCTTCTAGAATTTATCGGCGAATGGCCGCCGCAGCTTCATCCTCGCCGTCCTCGGGTAACAACACTTCCGGCAATGTGAATGCTTCTTCTTCCGCGGTTGACGACGCAGCTCCTTCTGCTTCCTCTGCCATTGATTTCCTCTCTATATGTCACAGTCTAAAGACAACAAAAAGAGCAGGATGGATACGTAAAGATGTTGAGGATCCAGAATCGGTAGCGGATCATATGTATCGAATGGGTTTGATGGCTCTTATTGCTTCAGATATCCCTGGCATAGACCGAAACAAGTGTATAAAAATGGCTATTGTTCACGATATTGCTGAAGCTATTGTTGGGGACATTACCCCATCAGATGGTGTTTCAAAAGAAGAAAAGAGTAGACGAGAAAGAGAAGCTCTTGATCACATGTGTAAAGTGCTAGGTGCTGGCTCTAGAGCAACGGAAATAGCTGAGTTGTGGATGGAGTATGAAGCAAATTCTTCACCAGAAGCTAAATTTGTCAAGGACCTTGACAAGGTGGAGATGATACTTCAAGCCTTAGAATATGAAGATGAGCAGCAGAAGGATTTGGATGAATTTTTCGAGTCAACTGCTGGGAAGTTTCAGACTGAAGTGGGCAAAGCTTGGGCCTTGGAAATAGTATCAAGGAGAAGGAAAAATCAACACCCCAATGATGTGATAACAAACAACGAACTGAGAAATGGTGGCTGTGTAGGAAGCAGCAAAGGTAGAAGTGGAACTCGATTTCAGGAGGAATAG 882 0.449 MSSGNRVLVCKSVSLFFTLPSCLSCTQLRSKFVAARAWSPAASRIYRRMAAAASSSPSSGNNTSGNVNASSSAVDDAAPSASSAIDFLSICHSLKTTKRAGWIRKDVEDPESVADHMYRMGLMALIASDIPGIDRNKCIKMAIVHDIAEAIVGDITPSDGVSKEEKSRREREALDHMCKVLGAGSRATEIAELWMEYEANSSPEAKFVKDLDKVEMILQALEYEDEQQKDLDEFFESTAGKFQTEVGKAWALEIVSRRRKNQHPNDVITNNELRNGGCVGSSKGRSGTRFQEE 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0977 293 Pfam HD domain 91 249 IPR006674 -
Lele24g0977 293 MobiDBLite consensus disorder prediction 263 293 - -
Lele24g0977 293 MobiDBLite consensus disorder prediction 54 73 - -
Lele24g0977 293 SUPERFAMILY HD-domain/PDEase-like 82 259 - -
Lele24g0977 293 ProSiteProfiles HD domain profile. 113 217 IPR006674 -
Lele24g0977 293 FunFam HD domain-containing protein 2 72 262 - -
Lele24g0977 293 MobiDBLite consensus disorder prediction 266 286 - -
Lele24g0977 293 PANTHER UNCHARACTERIZED 37 261 IPR039356 GO:0002953
Lele24g0977 293 Gene3D Hypothetical protein af1432 69 268 - -
Lele24g0977 293 SMART hd_13 109 226 IPR003607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0977 Lele-ChrLele24 7040133 7043801 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0977 24 7040133 7043801 Lele24g0977 24 7040133 7043801 ECH
Lele21g0990 21 6966461 6974384 Lele24g0977 24 7040133 7043801 hybridization
Lele22g1003 22 7068591 7072109 Lele24g0977 24 7040133 7043801 hybridization