Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0965 ATGGCTCTCAACATGAACTCAGTTCTTGTCATCATGTTGGCCATCGCAAGCCTTGTTTCAGTGGCTTCTGCCATTTCTGGAACTGCCACATTTTACACTAAATTAAAGCCATCTGCGTGCTTTGAGAACCGAGAGGAGGGCACGATGATCGCAGCAGCGAGTGACAAGATCTGGAAGAACGGAGCTGTATGCGGGAAAAAGATCAGAGTGAGGTGCACCGGTGGAACCACTGGCAGTCCTCACCCTTGCCGGCAAGGAAGTGTCACCGTCAAGATTGTGGATTTCTGCCCAAGATGCCAAGGAACCATCGATCTCTCTCGCCATGCTTTCTCTGCCATCGCTAACCCCGTCGAAGGAAAAATCCACATTGACTTCACCCCGTAA 384 0.5078 MALNMNSVLVIMLAIASLVSVASAISGTATFYTKLKPSACFENREEGTMIAAASDKIWKNGAVCGKKIRVRCTGGTTGSPHPCRQGSVTVKIVDFCPRCQGTIDLSRHAFSAIANPVEGKIHIDFTP 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0965 127 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 126 IPR044206 GO:0009627|GO:0048046
Lele24g0965 127 Gene3D - 24 126 IPR036908 -
Lele24g0965 127 SMART dpbb_1 50 125 IPR007112 -
Lele24g0965 127 SUPERFAMILY Barwin-like endoglucanases 12 126 IPR036908 -
Lele24g0965 127 FunFam Barwin-related endoglucanase 24 127 - -
Lele24g0965 127 Pfam Lytic transglycolase 51 124 IPR009009 -
Lele24g0965 127 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 127 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0965 Lele-ChrLele24 6891222 6891804 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0965 50 119 Expansin Gene Family AT3G45960 38.571 9.15e-06 41.6