Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0964 ATGATCGCCGCGGCCAGCGACTCCATCTGGGACAACGGAGCTGCATGCGGGAGACTGTATAGGGTCAGGTGCATCAGTGGGACCAACCAAGGTGAGGCTCAGCCTTGCCGGGGTGGAGCCGTCACCGTCAAGATTGTGGATCGCTGCCCTTCTCCGGCATGCAGAGGAACCATCGATCTCTCTCAGCAAGCCTTCTCCTCCATCGCTGACCCTAACGAAGGAAAAATCAACATTGAATACGCCCAGGTATGA 252 0.5714 MIAAASDSIWDNGAACGRLYRVRCISGTNQGEAQPCRGGAVTVKIVDRCPSPACRGTIDLSQQAFSSIADPNEGKINIEYAQV 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0964 83 Pfam Lytic transglycolase 3 80 IPR009009 -
Lele24g0964 83 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 1 82 IPR044206 GO:0009627|GO:0048046
Lele24g0964 83 Gene3D - 1 83 IPR036908 -
Lele24g0964 83 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 1 83 IPR007112 -
Lele24g0964 83 SMART dpbb_1 2 80 IPR007112 -
Lele24g0964 83 SUPERFAMILY Barwin-like endoglucanases 1 83 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0964 Lele-ChrLele24 6883628 6884005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0964 1 73 Expansin Gene Family AT2G45110 36.364 7.51e-09 48.5