Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0956 ATGGCTCTCAACATGAAAGCAGTGTTAGTAATGGCGCTTGCCATCTTGAGCATTTTCTCTGTGGCGTCTGCTATTTCTGGAACTGCCACCTTTTATACTGCTCCTTATGTTCCATCGGCATGCTATGGATTTCAAGATCAAGGGACTATGATTGTAGCAGCAAGCGACCCGATCTATAACAATGGAGCTGCGTGTGGAAGAATGTACAGAGTTACCTGCACTAGTGGCACCAACAGTGTGCCTAATCCGTGCAAGGCCGGAAGCGTCACCGTCAAGGTCGTCGATCGCTGCCCTTCACCGGGATGCCAAGCAACCTTGGATCTCTCTCAGGAGGCTTTCAGTATTATCGCTAACCCTGACGCAGGAAAAGTCAACATTGACTACGTCCAGGTCTGA 396 0.4949 MALNMKAVLVMALAILSIFSVASAISGTATFYTAPYVPSACYGFQDQGTMIVAASDPIYNNGAACGRMYRVTCTSGTNSVPNPCKAGSVTVKVVDRCPSPGCQATLDLSQEAFSIIANPDAGKVNIDYVQV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0956 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 131 IPR007112 -
Lele24g0956 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 3 130 IPR044206 GO:0009627|GO:0048046
Lele24g0956 131 FunFam Barwin-related endoglucanase 24 130 - -
Lele24g0956 131 Gene3D - 16 131 IPR036908 -
Lele24g0956 131 SMART dpbb_1 51 128 IPR007112 -
Lele24g0956 131 SUPERFAMILY Barwin-like endoglucanases 14 131 IPR036908 -
Lele24g0956 131 Pfam Lytic transglycolase 52 128 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0956 Lele-ChrLele24 6817838 6818463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0956 13 130 Expansin Gene Family AT2G45110 26.974 6.25e-07 45.1