Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0941 ATGCCAAAGTTACAAGCCTTGTCAGCCCAATACGGAAACCTCTTTCACTTTCTCCTTCTAAAATACCAACAAGTAATCCAATTTGAACTGCAACCAAAAAACATAATGCTTTCTTCTTCTTCTTCTTCACCTAGTAAATTACTTATTGGTCTGCCTTTAGACCCAGATGACAGCAGCGAACTTCTCTCGTGGGCGATTCGAGTTCTTGCCAATCCAAATGACACCATTGTCGCACTCCATATTCTTGTTTCTAAGGATAGGAAGAAGAGGAAGAAGAAGCGTGCTTCCGTGGCTAGAAGGCAATCGCAACTTCGACAAGCTAAAGCATATGCCATTTCTGTGCTTGGTGAATTTGCTAAGACATGTTGGTCTAAGCAGGTGAATCTGGAAGCCAAAGTGGCATTTAGTTCCAATGTAGGTGGAGGTTTAGTTGAAGAAGCCAAGTCCATATCTGCTGACTTTCTTCTTCTTCGTGGCTCAAGAAACCAGTTTAATAACAAGAATCAGGCCTCTGATGGAATTACCAAGTTCTGCTTTGAGAATGTTCATGAAAGCTGCACTGTTGTCTCAGTTGGTAAAACTTCCAAACGCAGTTTTACAAATTCTCAAGATAATTATGAATCAAGCTCAGGGTGGTTTAAGGAGGATAAGCAGAGTAGTAAGAGGGGAACATCCCCTGTTTTGAAGGCTTTTATATCAGACTCTAACAAGACTCAGACACGTTCACCAAGAACAGTATTGGACGCACTTGAGGGTCAATCTAACAGCACAGAAGATGATAATACCTTTAGCACAAGGATTTCAAGCATCACAAGGATTTCAAGCATCACAGACACTCCTTCAACAGGTTCTAATAAGATAAAAAGCCAATGCAATGATTTAAGGAAACCACCACAGTCACCATTCAGATTCATAGCCTCGCTTATTGCCTCACCATTATTATTAAGAAGGAAGAACTCCAAAAAGTCCCAAAATGAAAAGAGGCAACCCTTGTTGAAATGCTTCAGCTATGAAGAAATCTCCACCGCCACAAATGGCTTCCACCAAGAGAATTTGGTGGGACGAGGTGGGTACTCTGAAGTATACAGAGGAGATATTTCTGATGGACAAACAATTGCAGTGAAAAGGTTGTCCAAAGACAACAAGGATGCTAACAAGGAAAAGGAGTTCCTCATGGAACTAGGAGTCATCGGACATGTCTGTCATCCAAATACTGCAACCTTAGTTGGATGCTGCATTGAAAATGGACTCTATCTGATCTTCAAGTACTCTCAAAATGGAAACTTGGCCACTGCATTGCATGGTAAATCAGCAACATCACTTGAGTGGCCAGTGAGATACAGAATCGCCATTGGAGTAGCAAGGGGATTGCATTATCTTCACAAGTGTTGCAAACGCAGAATAATTCATCGTGACATTAAAGCCTCCAATGTGCTACTTGGTCCAGATTATGAACCACAGATTACTGATTTTGGGCTAGCAAAGTGGCTTCCAAACAAGTGGACTCATCATGCGGTAATACCAGTGGAAGGCACGTTTGGGTATTTGGCACCAGAATCCTTCATGCATGGAATAGTGGATGAGAAAACTGATGTTTACGCTTTTGGGATTCTTCTTCTGGAGATTATAACTGGAAGAAGACCTGTTGATTCCAAGAAACAGAATCTTCTCCTCTGGGTAACTTGTTTTTCTTTTTCAAATTCTGCCAAGCCTCTGATGGAATCAGGGAATATTAGGGAGCTGGCAGATCCGAGAATGGAAGGCATATACGATGAAGATGAATTGCAGAGAGTAGTAATCACAGCTTCATACTGTGTGAGACAATCTCCTCTTTGGCGTCCCCCGATGAGCGAGGTGTTGGAGCTGCTAACCAGTGGAGAAGAAAGTGAGGCAGGGAATAGTTGGAGGATCCCGAAGTTCACATCTGATGAATTGGATGATTATTCTATGGCTTTTGGATATGAACTGCCTTCTGACATATCTCTTGAGGAGTTTTTGTGA 2001 0.4203 MPKLQALSAQYGNLFHFLLLKYQQVIQFELQPKNIMLSSSSSSPSKLLIGLPLDPDDSSELLSWAIRVLANPNDTIVALHILVSKDRKKRKKKRASVARRQSQLRQAKAYAISVLGEFAKTCWSKQVNLEAKVAFSSNVGGGLVEEAKSISADFLLLRGSRNQFNNKNQASDGITKFCFENVHESCTVVSVGKTSKRSFTNSQDNYESSSGWFKEDKQSSKRGTSPVLKAFISDSNKTQTRSPRTVLDALEGQSNSTEDDNTFSTRISSITRISSITDTPSTGSNKIKSQCNDLRKPPQSPFRFIASLIASPLLLRRKNSKKSQNEKRQPLLKCFSYEEISTATNGFHQENLVGRGGYSEVYRGDISDGQTIAVKRLSKDNKDANKEKEFLMELGVIGHVCHPNTATLVGCCIENGLYLIFKYSQNGNLATALHGKSATSLEWPVRYRIAIGVARGLHYLHKCCKRRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPESFMHGIVDEKTDVYAFGILLLEIITGRRPVDSKKQNLLLWVTCFSFSNSAKPLMESGNIRELADPRMEGIYDEDELQRVVITASYCVRQSPLWRPPMSEVLELLTSGEESEAGNSWRIPKFTSDELDDYSMAFGYELPSDISLEEFL 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0941 666 Gene3D Transferase(Phosphotransferase) domain 1 425 639 - -
Lele24g0941 666 Coils Coil 374 394 - -
Lele24g0941 666 SUPERFAMILY Protein kinase-like (PK-like) 323 623 IPR011009 -
Lele24g0941 666 FunFam Probable receptor-like serine/threonine-protein kinase At5g57670 424 637 - -
Lele24g0941 666 SMART serkin_6 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0941 666 Pfam Universal stress protein family 51 157 IPR006016 -
Lele24g0941 666 Pfam Protein tyrosine and serine/threonine kinase 349 558 IPR001245 GO:0004672|GO:0006468
Lele24g0941 666 MobiDBLite consensus disorder prediction 198 299 - -
Lele24g0941 666 ProSiteProfiles Protein kinase domain profile. 347 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0941 666 Gene3D HUPs 37 187 IPR014729 -
Lele24g0941 666 PANTHER OS08G0249100 PROTEIN 88 636 - -
Lele24g0941 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Lele24g0941 666 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Lele24g0941 666 FunFam Putative receptor-like serine/threonine-protein kinase 315 423 - -
Lele24g0941 666 MobiDBLite consensus disorder prediction 223 296 - -
Lele24g0941 666 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0941 Lele-ChrLele24 6690239 6694301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0941 335 662 Trihelix Transcription Factor Family AT1G70460 39.884 2.51e-71 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele24g0941 PK_Tyr_Ser-Thr 8.5e-41 CL0016