Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0930 ATGGGTCGAGCTCCATGCTGTGACAAGGCTAACGTCAAGAAAGGACCTTGGTCCCCCGAAGAAGATGCTAAACTCAAAGCCTATATCGAAAAGTATGGAACTGGCGGCAACTGGATCGCTCTTCCTCAGAAAATTGGGCTCAAGAGATGTGGAAAGAGTTGCAGACTGAGATGGTTAAATTATCTGAGGCCTAATATCAAGCATGGCGGGTTTACTGAAGAAGAAGACAACATCATCTGTAGCCTTTACATTAGCATCGGAAGCAGGTGGTCCATAATCGCAGCACAGCTACCAGGAAGAACAGACAATGACATAAAGAACTACTGGAACACCAGATTGAAGAAGAAGTTACTGGGAAGAAGAAAACAATCGTCTGGTTTCAATAATCCAAGATACAGAAACGGATTATCGGGAAACGAACTTGATGATTCATCAAATGCCCTAAGCAACTCGGCTCTTGAACGCCTTCAACTTCATATGCAACTTCACCATCATCAAGGCCTCCAAAACCTAAACCCTACTTTCTCTAATTTCTTCAACAATCCTTCACTTCTCTGGCCCACCACCAATAAGCTCCATCATCCTCTGATGATGACTGGTAATAATAATAACGATCATCAGCAACAAAAAGAACATGAGCAATTCTACAAACCAACAGTTCCATCTAGTACGGCTAATAATACCTCTCTTCAACAACAAGAACATGATGAAAAGATCAATGGTTCTTCTTCACAGGTTGACATGTCTGTTCCTTTCATGGCTACTGGGATTGATCCAGTGGATTCTAATAGTATGGCAACGATGAGACTAGAAGGAGGAGTTCATCATCATCAGCAAGTTTCTGCACTTCAAGCAGAGTTGCATGAGATTATTCTCAGCAATAATATGACACAGCAGGATAATCAAGATCAGATGGCTGATTTTGATTGTTTTGCAGAGATGAATTCGAACGATTCTTCAAAGGACATGAACTTGATGAACATGTGGTGGTCCAACCATGACTTAATGGCTAAATCAGCATCTTCCAGTTCTTGGGGTTCAAGTACAAGCACAAGTACTGCTGTTCTTCAGCCAGAAGAAGGGATGTTTCAAGATAATTATGATGAACTCGTGGCCGGTTATAGTTTGTAG 1131 0.4173 MGRAPCCDKANVKKGPWSPEEDAKLKAYIEKYGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSSGFNNPRYRNGLSGNELDDSSNALSNSALERLQLHMQLHHHQGLQNLNPTFSNFFNNPSLLWPTTNKLHHPLMMTGNNNNDHQQQKEHEQFYKPTVPSSTANNTSLQQQEHDEKINGSSSQVDMSVPFMATGIDPVDSNSMATMRLEGGVHHHQQVSALQAELHEIILSNNMTQQDNQDQMADFDCFAEMNSNDSSKDMNLMNMWWSNHDLMAKSASSSSWGSSTSTSTAVLQPEEGMFQDNYDELVAGYSL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0930 376 CDD SANT 71 113 IPR001005 -
Lele24g0930 376 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lele24g0930 376 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lele24g0930 376 FunFam Transcription factor MYB36 70 135 - -
Lele24g0930 376 MobiDBLite consensus disorder prediction 120 143 - -
Lele24g0930 376 MobiDBLite consensus disorder prediction 341 359 - -
Lele24g0930 376 CDD SANT 16 62 IPR001005 -
Lele24g0930 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele24g0930 376 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lele24g0930 376 SMART sant 67 115 IPR001005 -
Lele24g0930 376 SMART sant 13 64 IPR001005 -
Lele24g0930 376 FunFam Transcription factor RAX3 7 68 - -
Lele24g0930 376 PANTHER OS09G0431300 PROTEIN 1 324 - -
Lele24g0930 376 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Lele24g0930 376 Gene3D - 69 134 - -
Lele24g0930 376 MobiDBLite consensus disorder prediction 219 243 - -
Lele24g0930 376 Gene3D - 7 68 - -
Lele24g0930 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Lele24g0930 376 MobiDBLite consensus disorder prediction 341 360 - -
Lele24g0930 376 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele24g0930 376 MobiDBLite consensus disorder prediction 122 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0930 Lele-ChrLele24 6581965 6583283 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0930 1 204 MYB Transcription Factor Family AT5G57620 74.757 7.27e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele24g0930 Myb_DNA-binding 4.3e-14 CL0123