Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0925 ATGGAGATGGAAACAGAAACTCCTTGTGATGAACTCATTTTCCGTTCCAAACTTCCTGACATTTACATCCCAACCCACCTACCACTGCACTCTTATTGTTTCCAGAATCTGTCCCAATTCAACCACCGTCCCTGCTTGATCAACGGCAAAACCAACGACACATTCACCTACGCCCACGTCGAACTCATCGCCAGAAAAGTTGCCTCCGGTCTCAACAACCTCGGCGTCCGACAAGGCCACGTCATCATGCTACTGCTCCTCAACTGTCCGGAATTCGTCTTCTCCTTCCTCGGAGCTTCCCACCTCGGAGTCATCGTCACCACAGCCAACCCATTTTACACTGAAGCCGAGGTCGCAAAGCAAGCTACCGCTTCAAACACCGAGCTCATCATCACGCACGCATCCTTCGCCGAGAAGGTTAAGGACTTCGCAGGAGACAACACCGTTAAACTGGTGCTCATCGATAACGAAAACGCAACCCCGTCGTCGTCGGCTATTATTACGTCTACTAATTTCGTACGTTTCTCCGATTTAATGAAGGCCGATGAGAATAAGATCCCTCCGGTGACGATACCTTATTCATCAGGCACCACAGGCCTTCCCAAGGGAGTGATGCTAACCCACAAAGGACTCGTCACAAATGTGGCTCAACTTGTTGATGGAGAAAACCCCAATTTGTATTTTCACAGTGACGATGTGATTGCATCTACGATGCTAGAGTTGGTTAAAAAACACAGAGTGACGGTTGCGCCGTTTGTGCCACCCATTCTGATGGCCATTGTTGAAGCTCCAAACCTGCAACAATACGACGTGTCGTCGATAAGGATGATCATGTGCGGGGCAGCCCCATTGCAGAAAGAGCTTGAAGATGCAGTGAAGTCTAAGCTTCCTAACGCTACTACTCTAGCACAGGCCTATGGGATGACGGAAGCTGGTCCAGCGGTGTCAATGAGCTTAGGTTTTGCGAAAGAGGCGTACGAGGTGAAATCAGGTGCGTGCGGGACTATAGTAAGAAACGCTGAGATGAAGATCGTTGATCCTGGCACTGGCATATCCATTGGCCGGAATCAAGTTGGTGAGATTTGTGTTCGAGGAAATCAGATTATGAAAGGTTACCTGAACGACCCAGAAGCAACGAAGAGAACAGTAGATGAAGGAGGATGGCTACACACAGGTGATATTGGATATGTAGACGAAGATGAAGAGCTCTTCATTGTGGATCGTTTAAAGGAAATCATCAAATACAAAGGCTTTCAAGTTGCTCCTGCTGAGCTTGAAGCTCTTCTTCTTTCTCATCCTTCCATTTCTGATGCTGCTGTTCTTCCGATGAAAGATGAAGTTGCAGGAGAGGTTCCTGTCGCACTTGTTGTGAAAGTAGAAGGTTTCAACATCTCTGAAGATGAAATAATGAAGTACATCTCACATAAGGTTGTGTATTACAAGAGAATCAAGAGGGTGTTCTTCGTGGGCTCTATTCCAAGGACAGCCTCCGGCAAGATTATGCGCAAAGACCTAAGAGCAAGGCTCTCCACCGAGTGA 1539 0.4769 MEMETETPCDELIFRSKLPDIYIPTHLPLHSYCFQNLSQFNHRPCLINGKTNDTFTYAHVELIARKVASGLNNLGVRQGHVIMLLLLNCPEFVFSFLGASHLGVIVTTANPFYTEAEVAKQATASNTELIITHASFAEKVKDFAGDNTVKLVLIDNENATPSSSAIITSTNFVRFSDLMKADENKIPPVTIPYSSGTTGLPKGVMLTHKGLVTNVAQLVDGENPNLYFHSDDVIASTMLELVKKHRVTVAPFVPPILMAIVEAPNLQQYDVSSIRMIMCGAAPLQKELEDAVKSKLPNATTLAQAYGMTEAGPAVSMSLGFAKEAYEVKSGACGTIVRNAEMKIVDPGTGISIGRNQVGEICVRGNQIMKGYLNDPEATKRTVDEGGWLHTGDIGYVDEDEELFIVDRLKEIIKYKGFQVAPAELEALLLSHPSISDAAVLPMKDEVAGEVPVALVVKVEGFNISEDEIMKYISHKVVYYKRIKRVFFVGSIPRTASGKIMRKDLRARLSTE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0925 512 Pfam AMP-binding enzyme C-terminal domain 424 499 IPR025110 -
Lele24g0925 512 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 507 - -
Lele24g0925 512 Pfam AMP-binding enzyme 235 415 IPR000873 -
Lele24g0925 512 SUPERFAMILY Acetyl-CoA synthetase-like 14 510 - -
Lele24g0925 512 CDD 4CL 23 505 - -
Lele24g0925 512 FunFam 4-coumarate--CoA ligase 2 411 512 - -
Lele24g0925 512 ProSitePatterns Putative AMP-binding domain signature. 191 202 IPR020845 -
Lele24g0925 512 Gene3D - 411 511 IPR045851 -
Lele24g0925 512 Gene3D - 237 410 IPR042099 -
Lele24g0925 512 Gene3D - 7 236 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0925 Lele-ChrLele24 6520873 6523033 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0925 1 477 Monolignol Biosynthesis Gene Families AT1G51680 56.622 0.0 570
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0925 24 6520873 6523033 Lele24g0925 24 6520873 6523033 ECH
Lele21g0947 21 6525454 6532560 Lele24g0925 24 6520873 6523033 hybridization
Lele22g0949 22 6611633 6612856 Lele24g0925 24 6520873 6523033 hybridization