Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0909 ATGATCGCGCTATTCACTGTAGGCGTAGCAGCAGTCAACTGTTCCCAGCTTCACTCTCTCTTACACCTCTTGCCTTTATATTTCACCGTCGATGCGTCGCCGGAGGCCACTGTCGGAGGAGGAGCTGCAACCACCAACGACCTCTCCGTCTTCTCCGGAGGCGTTCCCAAGTTCGAGGACTTCCTTGGCGGTGGCTCCGCTGCTACGTCGGTCACAGCTGCAGTACCCACACCGCCTGCTCCTCATCAGTTCTCCACCGACAACATATTCGGTTCTGAGCTAAAAACCATAGCCGCCGGCTTCCTCTCCGGCTTGGCCGGCGCTGAACGAACCGAGCCGCGAAAGCAAGCGCTGGCTCTCGCAGTGCCGTCCTCTAAGAAGACTCTGGATACCTTCGGGCAACGCACCTCCATCTACCGCGGTGTCACTCGGCATAGATGGACAGGGAGATATGAAGCTCATCTATGGGATAATAGTTGCAGAAGAGCAGGTCAAAGTAGGAAAGGAAGGCAAGGTGGTTACGATAAGGAAGAGAAAGCAGCGAGAGCTTATGATCTTGCTGCTCTCAAATATTGGGGTCCAACTACAACCACCAACATTCCAATTTCGAACTATGAGAAGGAACTGGAAGAGATGAAGAACATGACAAGACAAGAATTTGTTGCTTCCCTACGAAGGCACCACCAGCATGGGCGATGGCAAGCAAGAATTGGCAGAGTTGCCGGAAATAAAGACCTTTATCTCGGCACTTTCAGTACTCAAGAAGAAGCTGCTGAAGCATATGATATAGCTGCCATAAAATTTAGAGGACTAGGTGCAGTGACCAACTTCGACCTGAGCCGATACGACGTGAAGAGCATAGCCAACAGCAGTCTTCCCATTGGTGGATTCTCATCCAAACACAAAAACTCGTCAGATTCTTCCGCATCAGACACCAAAAGCATCGATGGAAGCCGATCCGCCGATAACAGCATCACCGCCCGAGAGTCATCCGCAGTCACCTTCGCATCCCAACCGGCCTCAACCTCGAACCTCAGCTTCGCCATACCCATCATCAAACAAGACCCAACCATTGATTACTGGGCCCATATCTTGGGTTACCATCATAACCCTTCATCCCATCTCAGAAACACTTACAACAACAATGTTACCGTCGCCTCTCCTTTACAAAGCTACAACAACAATAATAACAACACAACGGTACCGTTCAGCTTCGAGTTGCCGAGAAATAACAACAACCACAACGCATTTATGGATGGGGGTGTGATTGTTCAGAACATTCAGGTTCAGCAGCAGCAGCAGCAACAACAAAGTGGAAGCAATAATAACAATAACGGAAGTAGTGGAACTGTGGAATCAAGTTCAAGTTCAGGGATCCCATTGGGGACACCGATAGGTATAAATAATAGTAACAGTAGTTATGAGAGTTCTTGGCTACACACATTCCAAACACATGCAAAAGGAAGTCTCTTTCAAACGCCAATATTTGGGATGGAATGA 1500 0.4907 MIALFTVGVAAVNCSQLHSLLHLLPLYFTVDASPEATVGGGAATTNDLSVFSGGVPKFEDFLGGGSAATSVTAAVPTPPAPHQFSTDNIFGSELKTIAAGFLSGLAGAERTEPRKQALALAVPSSKKTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRRAGQSRKGRQGGYDKEEKAARAYDLAALKYWGPTTTTNIPISNYEKELEEMKNMTRQEFVASLRRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLGAVTNFDLSRYDVKSIANSSLPIGGFSSKHKNSSDSSASDTKSIDGSRSADNSITARESSAVTFASQPASTSNLSFAIPIIKQDPTIDYWAHILGYHHNPSSHLRNTYNNNVTVASPLQSYNNNNNNTTVPFSFELPRNNNNHNAFMDGGVIVQNIQVQQQQQQQQSGSNNNNNGSSGTVESSSSSGIPLGTPIGINNSNSSYESSWLHTFQTHAKGSLFQTPIFGME 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0909 499 SUPERFAMILY DNA-binding domain 226 280 IPR016177 GO:0003677
Lele24g0909 499 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 92 410 - -
Lele24g0909 499 FunFam AP2-like ethylene-responsive transcription factor ANT 137 203 - -
Lele24g0909 499 SMART rav1_2 138 207 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 SMART rav1_2 225 284 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 SUPERFAMILY DNA-binding domain 137 203 IPR016177 GO:0003677
Lele24g0909 499 MobiDBLite consensus disorder prediction 429 464 - -
Lele24g0909 499 PRINTS Ethylene responsive element binding protein signature 139 150 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 PRINTS Ethylene responsive element binding protein signature 260 280 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 CDD AP2 137 203 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 CDD AP2 226 280 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 ProSiteProfiles AP2/ERF domain profile. 138 201 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 ProSiteProfiles AP2/ERF domain profile. 217 278 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 Pfam AP2 domain 224 270 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 Pfam AP2 domain 138 193 IPR001471 GO:0003700|GO:0006355
Lele24g0909 499 Gene3D AP2/ERF domain 138 203 IPR036955 GO:0003700|GO:0006355
Lele24g0909 499 Gene3D AP2/ERF domain 223 280 IPR036955 GO:0003700|GO:0006355
Lele24g0909 499 MobiDBLite consensus disorder prediction 297 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0909 Lele-ChrLele24 6362791 6365968 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0909 79 499 AP2-EREBP Transcription Factor Family AT5G57390 50.108 1.17e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele24g0909 AP2 1.3e-09 CL0081