Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0900 ATGGGGGGAGACAAGGCAATCTGCCTTGAAGAGATCAAGAACGAGGCCGTTGATCTGGGTCTCTACGGGTTTTCTGGGACACCACCAGATGAACCAACTACCATTTTGGTCATTCCATGCCGTCAAAACTGTAATTTAACCAAACTGGACATCATAAGCGTTAAACTAGGTGACATTATTCCGGCTGATGCTCGCCTTCTCGAGGGTGATCCGTTGAAGGTTGATCAATCTGCTCTGACAGGAGAGTCTCTTCCTGTGACCAAAAACCCTGGAGATGAAGTCTTCTCTGGCTCAACTTGCAAACAAGGTGAAATTGAAGCTGTTGTTATTGCTACCGGTGTCCACACGTTCTTCGGGAAGGCGGCTCACCTCGTGGACAGCACCAACCAAGTTGGTCATTTCCAGAAGGCAAGGACTGGGATTAGAGAGGTGCATTTCTTCCCATTCAATCCTGTTGACAAGAGAACTGCTTTGACTTACATTGAAGCTGATGGAAGTTGGCACCGGGCAAGCAAAGGTGCTCCCGAGCAGGATGTTCCTGAGAGAACCAAAGAAAGCGCCGGTGCTCCATGGCAGTTTGTCGGGTTGTTGTCACTGTTTGACCCCCCTAGGCATGACAGTGCTGAAACCATCCGACGAGCTCTTAATCTTGGAGTAAATGTCAAGATGATTACCGGTGATCAACTAGCCATAGCAAAGGAGACAGGAAGGAGACTTGGCATGGGAACAAACATGTACCCATCTGCTTCCTTGCTTGGTCAAGATAAAGATGCAAATATTGCATCACTTCCTGTGGAAGAGTTAATTGAGAAGGCGGATGGATTTGCTGGCGTATTTCCAGGTTCAATATTCTCTTTCTGCTACTTTCTCTCAACAATTTTGCTAATCCTGAGTCCTGAACTTTTATATTATGTATTACTACGGTTGTTTCCAGAGCACAAATATGAAATTGTGAGGAAATTGCAAGAGAGGAAACACATTTGTGGAATGACTGGTGACGGTGTCAATGATGCTCCTGCTCTGAAGAAGGCCGATATCGGTATCGCAGTCGCCGATGCAACCGATGCCGCAAGAGGTGCTTCTGATATTGTCTTGACTGAACCTGGATTGAGTGTCATTATTAGTGCAGTCTTGACTAGCAGAGCTATTTTCCAAAGAATGAAAAACTACACTATCTATGCGGTCTCCATCACTATACGTATAGTGTTTGGATTCATGTTCATTGCACTGATATGGAAATTTGACTTCTCTCCTTTCATGGTTTTGATTATTGCCATCCTAAATGACGGAACAATCATGACAATTTCAAAAGACAGAGTGAAGCCGTCTCCCTTGCCTGATAGTTGGAAGCTGAAAGAAATTTTTGCCACTGGGGTTGTGCTTGGAGGTTACTTGGCTCTGATGACTATCATATTTTTCTGGGCAATGAAAGAAACTGACTTCTTCCACGACAAATTCAACGTTAGACCTCTGAATGACAGCCCACATGAAATGATGGCTGCATTGTACCTTCAAGTCAGTATAGTGAGCCAGGCTCTTATATTCGTGACCCGTTCTCGTAGTTGGTCCTACGTCGAACGCCCTGGATTGCTTTTAGTCAGTGCCTTCATTATTGCTCAGCTGATTGCTACCTTCATAGCAGTATATGCTGACTGGGGATTTGCAAAGATAAAAGGAATTGGATGGGGTTGGGCTGGAGTGGTCTGGCTCTACAGTGTTGTCTTCTATGTTCCACTCGACTTTATAAAATTCGCTATCCGTTACATCCTAAGTGGCAAGGCTTGGAACAATCTACTAGAAAACAAGATTGCCTTCACCACCAAGAAAGACTATGGAAAGGAGGAGAGGGAGGCTCAATGGGCACTTGCTCAGAGGACACTCCATGGACTTCAACCTCCAGAAACTTCTAGCATTTTCAACGATAAAAACAGCTACAGAGAGCTCTCTGAGATTGCTGAGCAGGCCAAGAGACGAGCTGAAGTTGCAAAGCTTCGCGAGCTTCACACGCTTAAGGGACATGTTGAGTCAGTGGTGAAGCTGAAAGGTCTGGACATTGACACAATTCAGCAGCACTACACTGTTTACCAACTGAAGTATGGAACCGAGACAGAATCTTCTTTGAAGCCTTGCAAGGACTAA 2139 0.4525 MGGDKAICLEEIKNEAVDLGLYGFSGTPPDEPTTILVIPCRQNCNLTKLDIISVKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKARTGIREVHFFPFNPVDKRTALTYIEADGSWHRASKGAPEQDVPERTKESAGAPWQFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDANIASLPVEELIEKADGFAGVFPGSIFSFCYFLSTILLILSPELLYYVLLRLFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTIIFFWAMKETDFFHDKFNVRPLNDSPHEMMAALYLQVSIVSQALIFVTRSRSWSYVERPGLLLVSAFIIAQLIATFIAVYADWGFAKIKGIGWGWAGVVWLYSVVFYVPLDFIKFAIRYILSGKAWNNLLENKIAFTTKKDYGKEEREAQWALAQRTLHGLQPPETSSIFNDKNSYRELSEIAEQAKRRAEVAKLRELHTLKGHVESVVKLKGLDIDTIQQHYTVYQLKYGTETESSLKPCKD 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0900 712 PRINTS H+-transporting ATPase (proton pump) signature 362 387 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele24g0900 712 PRINTS H+-transporting ATPase (proton pump) signature 303 319 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele24g0900 712 PRINTS H+-transporting ATPase (proton pump) signature 331 347 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele24g0900 712 PRINTS H+-transporting ATPase (proton pump) signature 503 524 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele24g0900 712 Coils Coil 645 665 - -
Lele24g0900 712 Gene3D - 201 280 IPR023214 -
Lele24g0900 712 Gene3D - 308 368 IPR023214 -
Lele24g0900 712 FunFam ATPase 4 plasma membrane-type 316 558 - -
Lele24g0900 712 PANTHER CALCIUM-TRANSPORTING ATPASE 188 626 - -
Lele24g0900 712 SUPERFAMILY Calcium ATPase, transmembrane domain M 380 590 IPR023298 -
Lele24g0900 712 FunFam Plasma membrane ATPase 41 112 - -
Lele24g0900 712 FunFam Plasma membrane ATPase 304 379 - -
Lele24g0900 712 Pfam E1-E2 ATPase 50 136 - -
Lele24g0900 712 SUPERFAMILY Calcium ATPase, transduction domain A 49 125 IPR008250 -
Lele24g0900 712 FunFam ATPase 2, plasma membrane-type 193 292 - -
Lele24g0900 712 Pfam haloacid dehalogenase-like hydrolase 311 345 - -
Lele24g0900 712 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 308 420 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele24g0900 712 Gene3D - 44 124 - -
Lele24g0900 712 Gene3D - 178 200 IPR023299 GO:0000166
Lele24g0900 712 Gene3D - 125 177 IPR023299 GO:0000166
Lele24g0900 712 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 131 206 IPR023299 GO:0000166
Lele24g0900 712 Gene3D - 643 694 - -
Lele24g0900 712 SUPERFAMILY HAD-like 192 377 IPR036412 -
Lele24g0900 712 Gene3D - 369 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0900 Lele-ChrLele24 6253681 6261391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0900 26 694 Primary Pumps ATPases AT4G30190 67.832 0.0 916