Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0882 ATGAAGAAGAGTTACTTCGATGTGGTCGGATTATGCTGTTCGTCGGAGGTTCCGCTGATAGAGAACATCCTAAAACCTCTCGAAGGAATCAAAGAGGTTTCCGTCATCGTCCCTTCACGAACCGTCATTGTCGTTCACGACACCCTGCTCATTTCTCAGTTCCAAATTGCTAAGGCGCTAAGCCAAGCAAGATTGGAGGCGAGTGTGAGGGTGTATGGCGATGAAAAGGAGGAGGAGAAGAAGAAGTGGCCGAGCCCTTACGCAATGGCGTCAGGAATATTGGTGGTGGTGTCACTGTTCAAGTACGTGTATGGCCCACTCGAGTACGTGGCCTTAGGAGCGGTAGCTGCTGGTGCTCTCCCCATTCTGCTCAAAGCTCTCTCCTCTCTTCGCCACCTACGACTTGACATTAACATCCTCATCGTTATGGCAGTTGCGGGAACGATAGCTATGCATGATTACGTGGAAGCTGCCACCATCGTTTTCCTCTTCTCCGTAGCCGAATGGCTCGAGTCAAGAGCCAGTCACAAGGCAAGTGCAGCAATGTCTTCGTTGATGAACATAGCTCCCCAGAAAGCAACCATAGCCGAAACAGGAGAGATTGTGGACGCCGACGAGGTCAAAGTGAACACAGTACTAGCCGTGAAAGCAGGGGAAGTGATACCAATCGATGGAATTGTTGTAGATGGAACCTGTGAAGTCGATGAGAAAACTTTGACCGGCGAGTCATTCCCTGTACCCAAACAAAAAGACTCTACTGTGTGGGCTGGCACTATCAATCTAAGTGGTTATATTTGTGTTAACACTAATGCGCTAGCTGAGGATTGCGTGGTAGCGAAAATGGCAAAGCTAGTGGAAGAAGCACAAAACAGTAAAACTAGGAGCCAGAGATTGATAGACAAGTTTGCCAAGTTTTATACCCCAGCTGTTGTAATCATATCAACACTTGTAGCGGTGATTCCAGTTTTGTTGAGAGTACATAATGTGAAACATTGGTTTCACTTTGCACTTGTCGTTCTAGTAAGTGCATGTCCCTGTGCCCTTGTCCTTTCTACACCAGTTGTGACTTTCTGTGCGTACACAAAAGCGGCCACATCGGGTCTTCTCATCAAAGGGGGTGATTACCTGGAAACCCTTGCAAAAGTTAAGGTCATGGCCTTTGACAAAACTGGAACTATTACAAAGGGAGAATTTGTGGTGACAAATTTCCAATCTCTTTGCGATGATGTAGATTTGAAAACGTTAATTTACTGGGTCTCAAGCATCGAAAGTAAGTCAAGTCATCCATTGGCAGCAGCAATTATTGATTATGGAAAGTCACTTTGTATTGATCCTAAGCCAGAAGAGGTGACAGACTATGAAAACTTTCCTGGAGAAGGTATTTGTGGAAAAATTGATCACAGATATGTTTACATTGGAAATAGAAAAATTGCCTCAAGAGCTGGGTCTAAGACAGTTCCTACCTTAGAAGGTGGCTCTCAGGGAGGAAAGACTATTGGTTATATATACTCAGAAGCAACTCCAATTGGAGTTTTCACTCTTTCAGATGCTTGCCGCTCTGGGGTAGTGGAGGCTATAGGTCAGCTAAAGTTATTGGGTATCAAAGCTTGTATGCTTACTGGAGATAGCCATGCAGCTGCCATGCAGGCTCAAGAGCAGCTAGGGCATGCTTTGGAGCAAGTCCACACAGAACTTTTACCAGAAGGAAAAGCAAAAATCATCACAGAATTCAAAAAGGAAGGAACAACAGCCATGGTAGGAGATGGTGTGAATGATGCACCAGCATTAGCTGCAGCTGATATTGGCATCTCGATGGGCATTTCAGGTTCTGCACTAGCAAGTGAAACAGGAAATATAATTCTCATGTCCAATGACATGAGGAAGATACCACAAGCGATTAAGCTTGCAAGAAAATCTCGTAGGAAAGTAATAGAAAATGTTATATTGTCAGTCGTGACTAAGGCTGTAATTATTGGCTTGGCCTTTGCTGGTCATCCGCTTGTTTGGGCAGCAGTTCTTGCCGATGTTGGGACATGCTTGTTAGTAATCTTAAACAGCATGCTCCTTCTGCGCAGTAGAGAGACGCATGGAGGAAAATGTTGTAGATCTTCCACTCAGCTACCCCTCCATAAAAGTGGATGTCATGCCCATGATGGCAAATCTTCTCATCACCATCACCGCCACCGCCACCACCATCACCATCATCAACACAAGTATGATAATCATCAGCATTCTAAATTCATAGAAAGCCATGACCAATGTAATTCCAGTGTTGAAATCCATGAACCAAATCTCTGTCATCATGGAAGATGTGAGAAAGGTGATGTCCAGTCACATGATGCAGAAAGCCATAGTTGTTCAGGCTCTCAGGATAGGATAATGATCGGAGCAGATAAGTGTACAACTTCAACAGACCGTCATGGTAGTTGTTTGGAACATGGTAACTCCCACAGCATATCAGATGGCCTCAAAAGAAATTTTGATCCAATCTCTCATGATGGAGCGTCAATGGGTTCTACCTGCCATTTCATGCACTCACATGATATAGAAAGCCAGGCTTGTTCAGGGTCTCCTCACATGATTCTGACTGGAGCATATAAATGTTCGAGTTCAATAGATAATCATGATTGTTTGGAACATAAGTCCCACAAGATATTACATTGCCACAACAGATATTGTGGCCCAGTAAATCATGATGAAGCATCACTTGTTTCTCCCTGCCGCTTGATCAATGATTTTGAAATTACTGAAGATCAAAATCTCAGAAAGACAATAAGATGCAATCATGAAATTGAGCATCAAAGTCCAGGGCCTCTATCTGACTTTAAGGTCTGTGGGGACGATCATATTGCATGCAATCATGAAATTAAGCACGCGGAATCAGCCTCAATGCATGCTTTTGGGAGTTGTGAAGAGCAAGAAAAATATTCTTGTTGCAAAGGTTGTCCAGACGAATGTAACGAATGTCCTGTTGTGTGCGCGCACTCAAATGAGATAGAAGCTGGCGCATCTGTTGAGGGCTCTTCAAAGAAATCCATCGAGTTTCCAGTGGCGCATGCTTGTATTAGTTTGCACAAGAGAGATATTGGTGGGTGTTGCAAGAGCTACATAAAGGAATGCTGTAGCAAACATGGACATTTAGGGGTGGGTTTTGGAGGTTTATCCAAAATTATTACAGAACAGGTGTAG 3189 0.4406 MKKSYFDVVGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVVHDTLLISQFQIAKALSQARLEASVRVYGDEKEEEKKKWPSPYAMASGILVVVSLFKYVYGPLEYVALGAVAAGALPILLKALSSLRHLRLDINILIVMAVAGTIAMHDYVEAATIVFLFSVAEWLESRASHKASAAMSSLMNIAPQKATIAETGEIVDADEVKVNTVLAVKAGEVIPIDGIVVDGTCEVDEKTLTGESFPVPKQKDSTVWAGTINLSGYICVNTNALAEDCVVAKMAKLVEEAQNSKTRSQRLIDKFAKFYTPAVVIISTLVAVIPVLLRVHNVKHWFHFALVVLVSACPCALVLSTPVVTFCAYTKAATSGLLIKGGDYLETLAKVKVMAFDKTGTITKGEFVVTNFQSLCDDVDLKTLIYWVSSIESKSSHPLAAAIIDYGKSLCIDPKPEEVTDYENFPGEGICGKIDHRYVYIGNRKIASRAGSKTVPTLEGGSQGGKTIGYIYSEATPIGVFTLSDACRSGVVEAIGQLKLLGIKACMLTGDSHAAAMQAQEQLGHALEQVHTELLPEGKAKIITEFKKEGTTAMVGDGVNDAPALAAADIGISMGISGSALASETGNIILMSNDMRKIPQAIKLARKSRRKVIENVILSVVTKAVIIGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLRSRETHGGKCCRSSTQLPLHKSGCHAHDGKSSHHHHRHRHHHHHHQHKYDNHQHSKFIESHDQCNSSVEIHEPNLCHHGRCEKGDVQSHDAESHSCSGSQDRIMIGADKCTTSTDRHGSCLEHGNSHSISDGLKRNFDPISHDGASMGSTCHFMHSHDIESQACSGSPHMILTGAYKCSSSIDNHDCLEHKSHKILHCHNRYCGPVNHDEASLVSPCRLINDFEITEDQNLRKTIRCNHEIEHQSPGPLSDFKVCGDDHIACNHEIKHAESASMHAFGSCEEQEKYSCCKGCPDECNECPVVCAHSNEIEAGASVEGSSKKSIEFPVAHACISLHKRDIGGCCKSYIKECCSKHGHLGVGFGGLSKIITEQV 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0882 1062 SFLD C1.7: P-type atpase like 369 638 - -
Lele24g0882 1062 ProSiteProfiles Heavy-metal-associated domain profile. 3 69 IPR006121 GO:0046872
Lele24g0882 1062 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 380 IPR023298 -
Lele24g0882 1062 Gene3D - 397 518 IPR023299 GO:0000166
Lele24g0882 1062 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 137 689 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele24g0882 1062 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 137 477 - -
Lele24g0882 1062 Gene3D - 174 289 - -
Lele24g0882 1062 Pfam haloacid dehalogenase-like hydrolase 382 600 - -
Lele24g0882 1062 SFLD p-type atpase 369 638 IPR044492 -
Lele24g0882 1062 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 160 664 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele24g0882 1062 PRINTS H+-transporting ATPase (proton pump) signature 618 643 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele24g0882 1062 PRINTS H+-transporting ATPase (proton pump) signature 586 602 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele24g0882 1062 SUPERFAMILY HMA, heavy metal-associated domain 2 69 IPR036163 GO:0046872
Lele24g0882 1062 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 2 692 - -
Lele24g0882 1062 FunFam Putative cadmium/zinc-transporting ATPase 3 1 71 - -
Lele24g0882 1062 SUPERFAMILY HAD-like 385 687 IPR036412 -
Lele24g0882 1062 PRINTS P-type cation-transporting ATPase superfamily signature 235 249 - -
Lele24g0882 1062 PRINTS P-type cation-transporting ATPase superfamily signature 386 400 - -
Lele24g0882 1062 PRINTS P-type cation-transporting ATPase superfamily signature 610 622 - -
Lele24g0882 1062 PRINTS P-type cation-transporting ATPase superfamily signature 586 605 - -
Lele24g0882 1062 PRINTS P-type cation-transporting ATPase superfamily signature 532 542 - -
Lele24g0882 1062 Pfam E1-E2 ATPase 192 364 - -
Lele24g0882 1062 FunFam Copper-transporting ATPase 1, putative 175 289 - -
Lele24g0882 1062 MobiDBLite consensus disorder prediction 712 737 - -
Lele24g0882 1062 Gene3D - 1 71 - -
Lele24g0882 1062 ProSitePatterns E1-E2 ATPases phosphorylation site. 388 394 IPR018303 -
Lele24g0882 1062 Gene3D - 377 637 IPR023214 -
Lele24g0882 1062 CDD P-type_ATPase_HM 88 688 - -
Lele24g0882 1062 FunFam Putative cadmium/zinc-transporting ATPase 3 397 518 - -
Lele24g0882 1062 SUPERFAMILY Calcium ATPase, transduction domain A 200 285 IPR008250 -
Lele24g0882 1062 MobiDBLite consensus disorder prediction 717 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0882 Lele-ChrLele24 6077771 6085217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0882 1 705 Primary Pumps ATPases AT4G30110 69.830 0.0 1037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele24g0882 24 6077771 6085217 Lele17g0713 17 18874016 18875837 CCT
Lele24g0882 24 6077771 6085217 Lele18g0809 18 5083798 5085433 CCT
Lele24g0882 24 6077771 6085217 Lele19g0844 19 5109224 5110340 CCT
Lele24g0882 24 6077771 6085217 Lele20g0614 20 13445502 13447118 CCT
Lele24g0882 24 6077771 6085217 Lele24g0882 24 6077771 6085217 ECH
Lele21g0906 21 6151844 6160573 Lele24g0882 24 6077771 6085217 hybridization
Lele22g0907 22 6184817 6193504 Lele24g0882 24 6077771 6085217 hybridization