Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0857 ATGGAAGACGACGATGGAGCATGCAACACTGGGCTGTGTCTGGGGCTGGGGATAGGAGGGTATGTGCCGAAGAAGAAGAAGGAGATCAGAGAGAACGATAATCAAGTGGGTCCTCGCTTGGACCTACCATTTGAACTTTGCCCCAAAGGATCATCAGAAGAAAACCTTAATACTACGACGGATCATGAAGAATATGGATTGTTCAGAAAGAAACTGAGGCTCACAAAGGATCAATCTTCGTTGCTTGAAGAAAGCTTCAAGCTACATACCACTCTTAATCCTGCTCAGAAATCTTATCTTGCTGAGAAATTGAATCTGAGACCAAGACAGGTCGAAGTTTGGTTTCAGAACAGAAGAGCGAGGACCAAGTTGAAGCAGACAGAGATAGATTGCGAGTTCTTGAGGAAATGCTGTGAGAATCTGAGAGACGAGAATCGAAGGTTGAAGAAAGAGTTGCAAGAGTTACGTGCACAGAAGGTTGTTGGGACCGCGGGGACCGGGACGTCGCCGTGGTTCCTTCAACTATCAAATACGACGGCGGCGTGTTCGTCATATGAGAAACCATTCAAAGGGAGTGAGGAGGCGAATAAGAATAACAATAGAAAGCATAAATTGGAGAGCTTGGCCTTAGATTGCAATGTGGGGTAA 648 0.4583 MEDDDGACNTGLCLGLGIGGYVPKKKKEIRENDNQVGPRLDLPFELCPKGSSEENLNTTTDHEEYGLFRKKLRLTKDQSSLLEESFKLHTTLNPAQKSYLAEKLNLRPRQVEVWFQNRRARTKLKQTEIDCEFLRKCCENLRDENRRLKKELQELRAQKVVGTAGTGTSPWFLQLSNTTAACSSYEKPFKGSEEANKNNNRKHKLESLALDCNVG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0857 215 CDD homeodomain 69 126 IPR001356 GO:0003677
Lele24g0857 215 Pfam Homeodomain 69 123 IPR001356 GO:0003677
Lele24g0857 215 SUPERFAMILY Homeodomain-like 61 126 IPR009057 -
Lele24g0857 215 ProSiteProfiles 'Homeobox' domain profile. 69 125 IPR001356 GO:0003677
Lele24g0857 215 Coils Coil 124 158 - -
Lele24g0857 215 Pfam Homeobox associated leucine zipper 125 158 IPR003106 GO:0006355|GO:0043565
Lele24g0857 215 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 54 200 - -
Lele24g0857 215 ProSitePatterns 'Homeobox' domain signature. 100 123 IPR017970 GO:0000981|GO:0006355
Lele24g0857 215 SMART halz 125 168 IPR003106 GO:0006355|GO:0043565
Lele24g0857 215 Gene3D - 66 130 - -
Lele24g0857 215 SMART HOX_1 67 129 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0857 Lele-ChrLele24 5859197 5860082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0857 61 187 Homeobox Transcription Factor Family AT4G37790 63.281 3.58e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele24g0857 Homeodomain 2e-15 CL0123