Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0855 ATGGCAATTGCAGCTTCAACCTCATCCTCCACCATGAGGATCTGCCATAGCCACAACAACTTCGACGAAGACGAGAGGAGGCAGCCGCCGCCGCCGGGAGAGGCAGACGATGGCTGCAGCGATGATGGTCACGAGCAGGATGTGGTCATGCCTGGGTTTCGCTTCCACCCAACTGAAGAAGAACTTGTCGAGTTCTACCTTCGCCGTAAGGTTGAGGGCAAGCCTTTCAATGTTGAGCTCATTACTTTCCTCGATCTTTATCGATATGACCCTTGGGAGCTTCCTGGTTTGGCAGCGATTGGGGAGAAGGAATGGTACTTCTATGTGCCTAGAGATAGGAAGTATCGGAACGGTGATCGGCCAAATCGGGTGACTACTTCTGGGTATTGGAAGGCCACCGGAGCCGATAGAATGATTAAAACAGATGGCTTCAGACCCATCGGACTCAAGAAAACCCTAGTCTTCTATTCCGGTAAAGCTCCTAAAGGCATCCGAACCAGTTGGATTATGACCGAGTATCGCTTGCTCCACCACGAAACCGAACGATTTCAAAAGGCTGAGATATCTCTTTGTCGAGTGTACAAGAGAGCAGGCATAGACGATCATCCCTCTCTGCCTCGTTATCTGCCGATAACATCATCATCATCAAGAGCTTCGAATTCACATCATAATTCACACAGCAAGAACAAGAACAACGTCAACCAATTAATGGTTCATCATCAGAACATCAGACTCCTAGGACAACAACACCGTGATCAATATCAAACAACGGACCAAGTTGTCGATAAAATGAATCATCAAACTGAGGAAAACAGTACTACTACCGATCATGCCAACAAGTTCAACAACAACAATCTGGATCATCATCAGGTCGAAGGCTTAATGCTCATGCAGCAACCAACAATGCAACAAGCAGAAGCTCAATTACATAAAGAAGAAGCCTCCTCCTTCTTCCCCGAAAAAGGCTCCACTACTTCTAATTCTTCCTCATTACCGTCTAATGAAAATCTTAATAATGCAATAATGGTGGATGATCATCTCAATCGGCTAGTGAGTTATAATCAGCAGTTGCAGTACTACAATAACATTTATGCTCCTGCTCAGAGTCATCAGCAATATCAGCCCTACACGCAGTTCTCTAACATTCTGTTGCAGCCATCATCACAGCAATCGACATCAATGGCTCTTAATAAGTCGATTCCACCAAACTCTTTCTCTGACAGATTGTGGGAGTGGAATCCAATAATCCCTGAGGCAACAAACCGAGACTTCACCAGCAATATGGCCTTCTTCAAGTAA 1299 0.4565 MAIAASTSSSTMRICHSHNNFDEDERRQPPPPGEADDGCSDDGHEQDVVMPGFRFHPTEEELVEFYLRRKVEGKPFNVELITFLDLYRYDPWELPGLAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKTDGFRPIGLKKTLVFYSGKAPKGIRTSWIMTEYRLLHHETERFQKAEISLCRVYKRAGIDDHPSLPRYLPITSSSSRASNSHHNSHSKNKNNVNQLMVHHQNIRLLGQQHRDQYQTTDQVVDKMNHQTEENSTTTDHANKFNNNNLDHHQVEGLMLMQQPTMQQAEAQLHKEEASSFFPEKGSTTSNSSSLPSNENLNNAIMVDDHLNRLVSYNQQLQYYNNIYAPAQSHQQYQPYTQFSNILLQPSSQQSTSMALNKSIPPNSFSDRLWEWNPIIPEATNRDFTSNMAFFK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0855 432 Pfam No apical meristem (NAM) protein 51 175 IPR003441 GO:0003677|GO:0006355
Lele24g0855 432 FunFam NAC domain-containing protein 35 58 199 - -
Lele24g0855 432 Gene3D NAC domain 58 199 IPR036093 GO:0003677|GO:0006355
Lele24g0855 432 MobiDBLite consensus disorder prediction 318 333 - -
Lele24g0855 432 ProSiteProfiles NAC domain profile. 49 196 IPR003441 GO:0003677|GO:0006355
Lele24g0855 432 SUPERFAMILY NAC domain 47 195 IPR036093 GO:0003677|GO:0006355
Lele24g0855 432 MobiDBLite consensus disorder prediction 210 229 - -
Lele24g0855 432 MobiDBLite consensus disorder prediction 20 47 - -
Lele24g0855 432 MobiDBLite consensus disorder prediction 313 333 - -
Lele24g0855 432 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 47 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0855 Lele-ChrLele24 5840122 5842214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0855 1 227 NAC Transcription Factor Family AT2G02450 69.869 3.02e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele24g0855 NAM 8e-34 No_clan