Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0853 ATGGTCTCGTTTCACCATTACTTAAGAACTTCTAAAAGGGATGAAATGAAAACAGATTATAACTACCATGCAAAAGAAAGGTTCAGAGAGGATCAGGAAGAGCAACTAGAAAGATCAAATATGGGAAACTGTCTGGCTCGTCAATCTGATTCTTCAGATTCTCATCGCAACTTCTACAATGGCGCCAACAACAACCAATCGGGGAGCAGCCAATTACCCCTTAGACACAGTAATTCGAGACTCTTGCAGAGTACAAGCAATTCCACTTTGCTTGGACAAAGCAGCACATCTGTCGGAAACAGCAGGCTATTTGGACCAAGTAGCAGTAACACATACACAACCAGCAATACTAATACATCTCTCTTAGGCTCTGATATCAGCCAAACTTTGGAAGTAAGAGGTGAAGAGGAGTTTCCTAATGGGAAGATCTTGGATGTGGCAAACCTGATAGATTTCACTCTTGAGGAACTTAAGGCAGCAACTCGAAATTTCAGAGCTGACTCTGTAGTGGGAGAGGGAGGCTTTGGCAGAGTGTATAAGGGTTTGCTGAACGGGGGAGCACCATCAAGAACTACAAGAGATGGGCGATTGGCTGTCGCCATCAAGAGATTGAACTCTCATAGCACACAAGGATTCATGGAATGGCAGTCAGAGGTGAATTTCTTAGGAAGGCTTTCTCATCCTAACCTTGTCAAGTTGTTTGGATTTGGAAGGGATAATAGAGAGTTATTTCTAGTGTATGAATTCATGCACAAAGGCAGCTTGGCTAACCACCTATTCGGAAGAGGTTCAAATGTACAGCCACTTCCATGGGACACAAGGTTAAATATTATAATTGGAGCAGCTAGGGGCCTAGACTTCTTACACTCATTAGAGAGTAAAATCATATACAGAGATTTTAAGCCAGCCAATATCCTACTTGACAAGAACTACATTGCCAAGCTATCCGACTTCGGTTTGGCCAAAGCTTTTCCTTCTGATGATAGAACTCATGTGACAACAAGGGTTATGGGATCTTACGGTTATGCTGCGCCTGAGTACGTTGCCACAGGTCACTTGACTGTGAAAAGTGATGTATATGGATTTGGAATTGTTTTGGTGGAGATACTGACAGGCAAATCAATACATGATATACTTAAGCTTCTGGGTGAGGGCCAATCATTGATCAGTTGGCTCAAATCAAATTTGTTGAGTAAAGGGAAGATGATAAATACAATGGACAGTAGATTGCAGGGGAGATATCCACCTAAGCTAGCATTACAAGTAGCTCACCTTGCTCATAAATGTGTCCAAACGGAACTTAAATTCAGGCCATCAATGAGGGAAGTCGTCGAGACATTGGAAAAAGTAGAGGCATCAAGTGACAAAACAACTTATACCAGAAAACGTGCCACTAATTCTGGGGCAGGTCAAAGCTATGGTGGCCCTGATTGA 1434 0.4254 MVSFHHYLRTSKRDEMKTDYNYHAKERFREDQEEQLERSNMGNCLARQSDSSDSHRNFYNGANNNQSGSSQLPLRHSNSRLLQSTSNSTLLGQSSTSVGNSRLFGPSSSNTYTTSNTNTSLLGSDISQTLEVRGEEEFPNGKILDVANLIDFTLEELKAATRNFRADSVVGEGGFGRVYKGLLNGGAPSRTTRDGRLAVAIKRLNSHSTQGFMEWQSEVNFLGRLSHPNLVKLFGFGRDNRELFLVYEFMHKGSLANHLFGRGSNVQPLPWDTRLNIIIGAARGLDFLHSLESKIIYRDFKPANILLDKNYIAKLSDFGLAKAFPSDDRTHVTTRVMGSYGYAAPEYVATGHLTVKSDVYGFGIVLVEILTGKSIHDILKLLGEGQSLISWLKSNLLSKGKMINTMDSRLQGRYPPKLALQVAHLAHKCVQTELKFRPSMREVVETLEKVEASSDKTTYTRKRATNSGAGQSYGGPD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0853 477 MobiDBLite consensus disorder prediction 38 73 - -
Lele24g0853 477 MobiDBLite consensus disorder prediction 452 477 - -
Lele24g0853 477 ProSitePatterns Protein kinases ATP-binding region signature. 170 202 IPR017441 GO:0005524
Lele24g0853 477 PANTHER OS01G0588500 PROTEIN-RELATED 91 451 - -
Lele24g0853 477 ProSiteProfiles Protein kinase domain profile. 164 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele24g0853 477 Gene3D Phosphorylase Kinase; domain 1 128 249 - -
Lele24g0853 477 Gene3D Transferase(Phosphotransferase) domain 1 250 471 - -
Lele24g0853 477 SUPERFAMILY Protein kinase-like (PK-like) 150 449 IPR011009 -
Lele24g0853 477 FunFam PTI1-like tyrosine-protein kinase 3 250 461 - -
Lele24g0853 477 MobiDBLite consensus disorder prediction 30 73 - -
Lele24g0853 477 Pfam Protein tyrosine and serine/threonine kinase 167 447 IPR001245 GO:0004672|GO:0006468
Lele24g0853 477 MobiDBLite consensus disorder prediction 88 121 - -
Lele24g0853 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Lele24g0853 477 MobiDBLite consensus disorder prediction 459 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0853 Lele-ChrLele24 5827284 5830375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0853 135 474 Receptor kinase-like Gene Family AT3G58690 43.220 1.53e-84 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele24g0853 PK_Tyr_Ser-Thr 1.3e-46 CL0016