Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0850 ATGGCTGTAGATCTGGTAGGCCTTCCTTGGAAGATGGAAGAACAGATGGCTATTCAAGAAGCTGCTTCCGCTGGATTGAAGAGCATGGAACATCTTATTCGTCTTCTTAATTCTTCTCAATCTTCGGCCGTTTCTGATAATCATCCCCACCGTCTTGATTGTGCCCAGCTCACCGATTTGACTGTTTCCAAGTTCAAGCAAGTCATCAACTTACTCAATCGCACCGGTCACGCTCGCTTCCGTCGTGCTCCTTCCACTAATCCCAATCCTCCTTCGTCATCTTCTTCTCCGCCTTCTTCTTCGGCTCTTCCTAATCCCTCCAAATCGCACCACCTCGCCGTGAATTCGGTTCAGTCATCTCACTCTCAGGGGTTGACCCTTGATTTTACCAAACCCTGTAAGGTCCAGACGCCGCCGATTAAACCTTCGACTGAGTTATCTGTGTCTCAGTTCTCCAAGGATACCTTCAGTATCTCCCCTCCCATGTCCACCACTAGCTCCTCCTTTATGTCTTCTATTACCGGAGACGGCAGCGTTTCCGACGGTAAAATAGGCCCCTCGCTGCTTCCTCCACCCGCTTCCGTCGTCTCCTCCGGTAAACCCCCTCTCTCCTCGGATCACCGGAAGAGGTGTCACGACTCTGCCTTCTCTGAGAAAATTTCATCCTCCGGTCGCTGCCATTGTTCTAAGAGAAGGAAATCGCGAGTTAAAAACACGATCCGTGTGCCGGCGATAAGCTCTAAGATCGCTGATATTCCGCCGGACGAGTATTCCTGGAGAAAGTATGGGCAGAAACCGATCAAGGGCTCACCCTATCCTCGTGGCTATTACAAGTGCAGCACTGTAAGAGGGTGCCCGGCGAGAAAGCATGTGGAGCGAGCTCAAGATGATCCCAAGATGCTGATCGTAACATATGAAGGTGAGCACCGTCACGCTGTGGAAGTGCGAGCGGCGGAGTGCGGTGGTGCAGGCATCGGTCTTAGCCTTCAAGCCAGCTAA 999 0.5175 MAVDLVGLPWKMEEQMAIQEAASAGLKSMEHLIRLLNSSQSSAVSDNHPHRLDCAQLTDLTVSKFKQVINLLNRTGHARFRRAPSTNPNPPSSSSSPPSSSALPNPSKSHHLAVNSVQSSHSQGLTLDFTKPCKVQTPPIKPSTELSVSQFSKDTFSISPPMSTTSSSFMSSITGDGSVSDGKIGPSLLPPPASVVSSGKPPLSSDHRKRCHDSAFSEKISSSGRCHCSKRRKSRVKNTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHAVEVRAAECGGAGIGLSLQAS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0850 332 Gene3D WRKY domain 238 313 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele24g0850 332 Pfam Plant zinc cluster domain 208 251 IPR018872 -
Lele24g0850 332 FunFam WRKY transcription factor 65 237 314 - -
Lele24g0850 332 ProSiteProfiles WRKY domain profile. 248 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele24g0850 332 SUPERFAMILY WRKY DNA-binding domain 251 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele24g0850 332 SMART WRKY_cls 253 313 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele24g0850 332 MobiDBLite consensus disorder prediction 188 209 - -
Lele24g0850 332 Pfam WRKY DNA -binding domain 255 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele24g0850 332 MobiDBLite consensus disorder prediction 76 119 - -
Lele24g0850 332 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 313 IPR044810 GO:0003700
Lele24g0850 332 MobiDBLite consensus disorder prediction 98 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0850 Lele-ChrLele24 5805096 5806367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0850 1 311 WRKY Transcription Factor Family AT2G24570 57.632 2.44e-101 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele24g0850 WRKY 3.6e-26 CL0274