Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0837 ATGTCTGCCTGTTTAAGCGGAGCTAGTGGAAGAACTTATGGGTTCGATTTCGATTTTGTCAAATCTCCATCTACATCGACCCGAAGTTCGCATACGTCTTCTTCTCCTTCTTCAACTATCTCGGAATCGAGCGATTCTCCACTTGCTATCTCCACTAGAAAATCTCGAACCCCTCGAAAGCGACCCAACCAAACTTACCATGAAGCTGCCGCAATGCTTTCCACAGCTTACCCAAATCTCTTCCCCTCCGAAAGCCTAAAAAAACCAGGCAAGTTCACCAAAACAACCGATAATTTTGCGGATGAATCTTCAGAATTGTTCTTCCCTTTCCAAGCATTTGATACCTCCTCTTTCCTACTTCAACACCAACCAATCCAACAGAAGCCTGGTAATTTTCCAGCGGAGCCCAAAGCGGTTAATCGAACAGAAAAATCTTGCCACAGCCCAGGGGAGATTAGCTCACGAGTGAATACTCGAGAATTCGAGGACGATTGCCGAGAAGATTTCGATGCTGAATCGATTCTCGATGAGGAAATCGGAGAGGGAATCGATATCGATAGCATCATGGGAAGCAGGGCCGAAGACTCCAGCGGCGCGTCTTGTCACGACGAACACGTGAATCCCCGGACTGTGGATTCGACGGGATTTAATTTTGGCGGGAATTTCGATTTACGGCTAAGAGCTCTCCGTGGAGTCGACGAAGGGAATTATTGGTGGAGCTTTCCCGCTGTTGTGAACATGCTTGAAATCTCACCAGAAATAAGAAAGCCTACTCCGGCGGCATCAGTTTCGCCGGAGAAGAAAAAGAAGAAGACGAAGAAGGTGGGAAAGCTGACGACCATCGAATCAAAGATTCCGGGATGGCCGGAGGAGAGTTCGATTCCAAAGGCGAAATCAAATCCTGGTTTGCTGTTGAAATTGAATCACAACGAGGTTTTGAATGCTTGGTCGGACCGGAGTTCACCGTTCACCGGCGAAGGTCCCTCTTCTGTCGTGGCCGGAAATGATATCACGGCACGGCTGGCACAAATAGATTTGTTGTGGGCGAGCGGAGAAGGAGGAGGGATGAGGGAAGCCAGCGTGATGCGCTACAAGGAAAAGCGCCGTACACGTCTCTTCTCTAAGAAGATTAGATATCAAGTTAGAAAAGTCAACGCTCATCAACGGCCCAGAATGCAGGGGCGATTTGCCAGGAGGCCCAAGGGTTGCTCTAACGCAGATGGCTCATAA 1230 0.4878 MSACLSGASGRTYGFDFDFVKSPSTSTRSSHTSSSPSSTISESSDSPLAISTRKSRTPRKRPNQTYHEAAAMLSTAYPNLFPSESLKKPGKFTKTTDNFADESSELFFPFQAFDTSSFLLQHQPIQQKPGNFPAEPKAVNRTEKSCHSPGEISSRVNTREFEDDCREDFDAESILDEEIGEGIDIDSIMGSRAEDSSGASCHDEHVNPRTVDSTGFNFGGNFDLRLRALRGVDEGNYWWSFPAVVNMLEISPEIRKPTPAASVSPEKKKKKTKKVGKLTTIESKIPGWPEESSIPKAKSNPGLLLKLNHNEVLNAWSDRSSPFTGEGPSSVVAGNDITARLAQIDLLWASGEGGGMREASVMRYKEKRRTRLFSKKIRYQVRKVNAHQRPRMQGRFARRPKGCSNADGS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0837 409 MobiDBLite consensus disorder prediction 22 53 - -
Lele24g0837 409 MobiDBLite consensus disorder prediction 22 64 - -
Lele24g0837 409 ProSiteProfiles CCT domain profile. 357 399 IPR010402 GO:0005515
Lele24g0837 409 Pfam CCT motif 357 399 IPR010402 GO:0005515
Lele24g0837 409 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 400 - -
Lele24g0837 409 MobiDBLite consensus disorder prediction 385 409 - -
Lele24g0837 409 MobiDBLite consensus disorder prediction 256 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0837 Lele-ChrLele24 5661206 5664487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0837 303 399 C2C2-CO-like Transcription Factor Family AT1G73870 46.847 7.87e-22 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele24g0837 CCT 1.2e-16 CL0281