Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0808 ATGGCAAGTACAGCAACACTGATATTAAATCCTGCAATGGAGAGCTGTGAATCTGTTGGAAGTGATGAAAATCATGCAGATGCTAGTCCACAGCATCGTATTACAGTATCTGCAGGTGTAAAGGAGAATCAGGTAGGTGCTTCGCATGTGCCAGAAATGTTCATTAAATGTAACCGTAATTGGACCTCAGATGAAACCCATAATCAGGGAGGGAGGGAAAATGAACGTAGATTAGAGGTTGATTTTCAACGTTTGCATGATTCAAGGTCTCAATCTGTGGCCTGTGACAATCGCAGCATCCGTGGTGAGGAATCTTCAACTTCAGAGATTGATTTACCCAATTCTATGAAGGTTGAAGATAATGTCCATGGTATGTACAGTTTGAACGATTCATATACTGTGCAGGAGCCGGTGCAAGACATTGTTTCTGTTCCAACAGATCCTGAGAGTGAAGATGGCATTGGGTGGGATGGGTCTGATCCAAAACTAGTTGCTCCACCTCTTGAGATGCCAATGGAGGAAAAAATATGCAGAGCAAGCTTCCAGAAGGATTTGGATCTGAATAGTGGACCTCTTTGGGGCTTTTCATCCATTTGTGGAAGGAGACAGGAGATGGAGGATGCTTTTGCTGTAAATCCTCATCTTTTGCAAGTTCCTTCACATATGCTAATGGATAATACTGGGAATGAAAATACTGAAAACTCAGTTGCACACTTCTTTGCTGTTTATGATGGACATGGAGGCTGTCAGTGCTTGCTGAGGAGATACAAGATTCAGACTCAAGTTTGGATGGAAGTAGTTCGATGGACAATTGGAAGAAAGCATTCTCCAATTGTTTTCAGAAAGTTGATGACGAAGTTGGAGGAGTTCATGCTGAGAACAATGAAAACAATAATGATGGATCAGAATCTAGTGTTGAACCACTTGCTAACTGTTGGTTCTACTGCAGTGGTTGTCATTTTATGCCAAAACCACTTAATAGTTGCAAATTGTAGCGATTCAAGAGCAGTCTTGTGTCGTGGAAAGGAAGCGCTGCCATTATCTTCTGATCACAAAACAAATAGAGAGGATGAGTGGGCCAAGATAGAAGCTGCAGGAGGAAGGATCATCCAACAGAATGGGTACCGGGTGCTTGGCATCTTGGCAGTGTCAAGGTCCATAGGTGATAGGTATTTACAGCCATGGATAATTCCTACACCAGAAGTCAAGTTTGTCCAGAGGGAGAAAAAGGATGAGTGCCTAATTCTGGCAAGTGATGGTTTATGGGATGTCATGACAAATGAAGAAGCCTGCGAGATTGCACGAAAACGAATCCTACTTTGGCAAAAGAAGCACGGCAATGGTGAATCGACAGGGCCGGGCGAGGGAGTTGATCCTGCAGCACAGTATGCTGCAGAGTACTTATCCAGAGTTGCCCTCCAAAGGGGAAGTAAAGATAACATTTCTGCTATAGTGATAGACTTGAAGGGTAAAAGAAAATTCAAGACCAAGGCATGA 1497 0.4315 MASTATLILNPAMESCESVGSDENHADASPQHRITVSAGVKENQVGASHVPEMFIKCNRNWTSDETHNQGGRENERRLEVDFQRLHDSRSQSVACDNRSIRGEESSTSEIDLPNSMKVEDNVHGMYSLNDSYTVQEPVQDIVSVPTDPESEDGIGWDGSDPKLVAPPLEMPMEEKICRASFQKDLDLNSGPLWGFSSICGRRQEMEDAFAVNPHLLQVPSHMLMDNTGNENTENSVAHFFAVYDGHGGCQCLLRRYKIQTQVWMEVVRWTIGRKHSPIVFRKLMTKLEEFMLRTMKTIMMDQNLVLNHLLTVGSTAVVVILCQNHLIVANCSDSRAVLCRGKEALPLSSDHKTNREDEWAKIEAAGGRIIQQNGYRVLGILAVSRSIGDRYLQPWIIPTPEVKFVQREKKDECLILASDGLWDVMTNEEACEIARKRILLWQKKHGNGESTGPGEGVDPAAQYAAEYLSRVALQRGSKDNISAIVIDLKGKRKFKTKA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0808 498 ProSitePatterns PPM-type phosphatase domain signature. 239 247 IPR000222 GO:0043169
Lele24g0808 498 Gene3D - 181 498 IPR036457 -
Lele24g0808 498 MobiDBLite consensus disorder prediction 89 108 - -
Lele24g0808 498 FunFam Protein phosphatase 2C 50 190 496 - -
Lele24g0808 498 SMART PP2C_4 182 486 IPR001932 -
Lele24g0808 498 Pfam Protein phosphatase 2C 194 481 IPR001932 -
Lele24g0808 498 CDD PP2Cc 194 488 IPR001932 -
Lele24g0808 498 PANTHER PROTEIN PHOSPHATASE 119 488 - -
Lele24g0808 498 SUPERFAMILY PP2C-like 190 490 IPR036457 -
Lele24g0808 498 ProSiteProfiles PPM-type phosphatase domain profile. 192 488 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0808 Lele-ChrLele24 5448146 5450346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0808 176 497 PP2C-type Phosphatase Gene Family AT4G26080 52.424 2.48e-104 317