LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele24g0804	ATGCTTACGTGCATAGCTCGTCCCAAGAAACCCGGGAGTGACTCGCTGAGTCAACCCGATGATTCCGATGCCAAAAACCAAGCCATCAAACCCCTTACTTCTCAGCTTAAGGATATGGCGTTGAAAGCATCGGGAGCGTACAAGCATTGTAGCCCCTGCACGGGGCCGACCACGCAGACTCGACTCCGGAGCAATATCGAATCAGACACGGATTCGGATCGTTTCCGGTGGTCGTATCGGAGAACAGGGAGCTCAAGCTCGACGACGACGAGGACATGGGGGAAGGAGATGGAAGCGAGGCTCAGGGGGATTTCGAGTGGAGAAGGGACGCCGAATTCGTCCAGTGGACGGCGAGTGGAGCCGGTAGTGTTGTTCGTGGAAGAGAACGAACCCAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTTCTGATCACATTTGTTTCACTTCCGCGTGGCGGGAATGATCTGAAGCGAATACGATTCAGTGTTGGTCAAGATGGGACCCTAAAGCATCTGGATCGTTTGATGACATTGTCTTTTGGCCTGTCAATTTGAGATGTAGTTGACACATTAAGTCGCGAGATGTTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAAGTTATGGAACTTTACAACGTTCGAAGATTTAACCGCCAAGCTTTCCCTCTTCCAACGCCCCCAAGATCCGAAGATGAGAGTTCAAAGATTGAATCCGTGGAAGACAGCCCAGTGACACCTCCGCTAACTAGGGAACGTTTACCTCGTAATTTGCACCGTCCTACAGGAATGGGAATGGGATACTCATCCTCTGATTCATTTGATCATCAATCAATGCAATCCCGGCATCCCTATGACTCTTATGGCATGAACTCGACTCCCAAAGTTTCCACCATTAGCGCAGCCAAGACAGAAATATCATCAATGGACGCCTCCATGAGAAGTAGCTCATCCCGAGAAGCTGATCGCTCCGGGGATTTTTCAATCAGCAATGCCAGCGATCTGGAGACTGAATGGGTTGAGCAAGATGAACCTGGGGTTTATATCACCATTAGAGCATTACCGGGTGGCAAAAGGGAGCTCAGAAGAGTCAGATTCAGGTATGCTTACGCTCAATTTTATGGCCTGACATATTCCCTTGTTGGCTATGCTGTTGTGACTAGATAA	1179	0.5004	MLTCIARPKKPGSDSLSQPDDSDAKNQAIKPLTSQLKDMALKASGAYKHCSPCTGPTTQTRLRSNIESDTDSDRFRWSYRRTGSSSSTTTRTWGKEMEARLRGISSGEGTPNSSSGRRVEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSVGQDGTLKHLDRLMTLSFGLSIXDVVDTLSREMFNKWQAQRWWAENYDKVMELYNVRRFNRQAFPLPTPPRSEDESSKIESVEDSPVTPPLTRERLPRNLHRPTGMGMGYSSSDSFDHQSMQSRHPYDSYGMNSTPKVSTISAAKTEISSMDASMRSSSSREADRSGDFSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFRYAYAQFYGLTYSLVGYAVVTR	392

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele24g0804	392	ProSiteProfiles	BRX domain profile.	341	392	IPR013591	-
	Lele24g0804	392	MobiDBLite	consensus disorder prediction	227	296	-	-
	Lele24g0804	392	MobiDBLite	consensus disorder prediction	15	33	-	-
	Lele24g0804	392	MobiDBLite	consensus disorder prediction	80	116	-	-
	Lele24g0804	392	MobiDBLite	consensus disorder prediction	268	296	-	-
	Lele24g0804	392	MobiDBLite	consensus disorder prediction	80	94	-	-
	Lele24g0804	392	ProSiteProfiles	BRX domain profile.	132	217	IPR013591	-
	Lele24g0804	392	PANTHER	PROTEIN BREVIS RADIX-LIKE 1	1	371	IPR044532	-
	Lele24g0804	392	MobiDBLite	consensus disorder prediction	1	36	-	-
	Lele24g0804	392	Pfam	Transcription factor regulating root and shoot growth via Pin3	192	216	IPR013591	-
	Lele24g0804	392	Pfam	Transcription factor regulating root and shoot growth via Pin3	340	371	IPR013591	-
	Lele24g0804	392	Pfam	Transcription factor regulating root and shoot growth via Pin3	132	162	IPR013591	-
	Lele24g0804	392	Pfam	Transcription factor BRX N-terminal domain	24	53	IPR027988	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele24g0804	Lele-ChrLele24	5426370	5431146	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele24g0804	1	382	Major Intrinsic Protein MIP	AT1G31880	37.313	3.90e-66	212