Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0801 ATGGCTGACAACGTCCAAAGCCCCTTAACACTCTCACCTCCTCCTCCTCCGTCGTCATCTTCTTCTTCTCCTTCCCCTAAACCCGGCATGACCATGCTGTACTACGGCCTGGCGGTGGTCGGAACCGCAGCCATAGTGTTAGCCATGTACAACCTCATCATCATCAGACGGTGCAGCCGCAGTCGCCGGCACGCACAAGGGACTACGGGAGACGACCGGGAGGTGGAGGTGGGGATCGCGGCGGCAGGAAGTAGTAGCCGGAGCTTTGAATGCTCGAACAGGAACTTGCTTTCAAGCTTCAAGTATAAGAAAGAAGCAGAAGAGAAGGAAGAAGTAGGAGGAGGAAGAGGTGAGGAATATGAATGCCCAGTATGCTTATCGGTGTTTGAAGAAGGAGAAGAAGTGAGGAAGCTACCTCGCTGTAATCATTCGTTTCATGCGATTTGTATAGACATGTGGCTTTACTCTCACTTGGATTGCCCAATTTGTCGAACACATGTTGGCACAACAGACTGA 516 0.5155 MADNVQSPLTLSPPPPPSSSSSSPSPKPGMTMLYYGLAVVGTAAIVLAMYNLIIIRRCSRSRRHAQGTTGDDREVEVGIAAAGSSSRSFECSNRNLLSSFKYKKEAEEKEEVGGGRGEEYECPVCLSVFEEGEEVRKLPRCNHSFHAICIDMWLYSHLDCPICRTHVGTTD 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0801 171 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 22 167 IPR044675 -
Lele24g0801 171 Pfam Ring finger domain 121 164 IPR001841 -
Lele24g0801 171 SMART ring_2 122 163 IPR001841 -
Lele24g0801 171 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 170 IPR013083 -
Lele24g0801 171 FunFam RING-H2 finger protein ATL1 76 169 - -
Lele24g0801 171 SUPERFAMILY RING/U-box 121 169 - -
Lele24g0801 171 MobiDBLite consensus disorder prediction 9 23 - -
Lele24g0801 171 MobiDBLite consensus disorder prediction 1 26 - -
Lele24g0801 171 ProSiteProfiles Zinc finger RING-type profile. 122 164 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0801 Lele-ChrLele24 5409280 5409795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0801 37 167 C3H Transcription Factor Family AT5G17600 36.090 6.02e-20 83.6