Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g0795 ATGGGAAGAAGCCCTTGTTGCTCCAAGGAGGGCTTGAACAGAGGTGCCTGGACCGCTCATGAAGACAAGATTCTCAGAGACTTCATCTCCGTCCACGGCGAAGGACGGTGGCGCAACCTCCCCAAGCGAGCAGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTCCGATGGTTAAACTATCTCAGACCAGATATCAAGAGAGGCAATATCACGTCTGATGAAGAAGAGCTTATCATTCGTCTTCACAAGCTCTTGGGAAACAGATGGTCTTTGATCGCCGGCAGGCTTCCAGGGCGAACAGACAATGAAATAAAGAATTACTGGAACACGAATTTAGGTAAGAAAGTGAAGCATAACCCTCATCACCAGAACAATGTTGCTTCCTCTGGTAGATTCTCTGCTCAACCTAAGACCGAAAAAACTTCCAACAATAATCCTCCGAATCTCAGGCCAACATCTAACACCTTGACCTCTCCAGATTCCAAGCTCAGTAATAATGTTGTCCGTACAAAAGCCACAAAGTGCTCTAAGGTGGTCATCACCCCACGTCCTCCTTCTTCCAGGCAGCCGACCAAGGCTGAAGTAGCTGAGACGTTTCAACCAGTGGATGTTGCTGCTGCGGCGGAGGCGGCTGACTGTAACCAGATGCCAGAATTGCTCAACGCTGAGGGGAAGGATCATCATCAGGAGCCGTCATCTGGGGATTTGCTAGTGGATTTCAACGTGGGAGAGATCTGCTTGTCAGACCTTCTGAACTCGGATTTCTCAGATATGTGCGACTTCAGTCACAACAATAGCCTCGAAGGTGGGTGCTTATCCCCATCTTCCGACCAACCCTTCGTGTTCTCCGATGAAATTCTGAACGACTGGATGCAGAGCAAGGCGCAAGAGACAAATGTGGCCAATAATCTTCACTCTTTCACATCCTTCCTGGAATCCAGTGAGGAATGGCTAGCAGAGTAG 963 0.4891 MGRSPCCSKEGLNRGAWTAHEDKILRDFISVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITSDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKHNPHHQNNVASSGRFSAQPKTEKTSNNNPPNLRPTSNTLTSPDSKLSNNVVRTKATKCSKVVITPRPPSSRQPTKAEVAETFQPVDVAAAAEAADCNQMPELLNAEGKDHHQEPSSGDLLVDFNVGEICLSDLLNSDFSDMCDFSHNNSLEGGCLSPSSDQPFVFSDEILNDWMQSKAQETNVANNLHSFTSFLESSEEWLAE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g0795 320 MobiDBLite consensus disorder prediction 113 164 - -
Lele24g0795 320 FunFam MYB-related transcription factor 13 66 - -
Lele24g0795 320 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele24g0795 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele24g0795 320 SMART sant 66 114 IPR001005 -
Lele24g0795 320 SMART sant 13 63 IPR001005 -
Lele24g0795 320 MobiDBLite consensus disorder prediction 122 164 - -
Lele24g0795 320 CDD SANT 71 112 IPR001005 -
Lele24g0795 320 Gene3D - 14 66 - -
Lele24g0795 320 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele24g0795 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele24g0795 320 Gene3D - 69 145 - -
Lele24g0795 320 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 181 - -
Lele24g0795 320 FunFam Transcription factor TT2 70 143 - -
Lele24g0795 320 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele24g0795 320 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele24g0795 320 CDD SANT 16 61 IPR001005 -
Lele24g0795 320 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g0795 Lele-ChrLele24 5347152 5348302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g0795 4 157 MYB Transcription Factor Family AT3G13540 59.877 3.36e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele24g0795 Myb_DNA-binding 8.4e-13 CL0123